Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00166 ATGCAGTTCCCACAACAATTTTTGTTCATTTTTATGTTTTCAGTAATGATTGTATGCAATGTTTGTGAGTCCCAAAATTGTGCTAATCCACCAAAGTGGGTTACTGTTAGCAAGTCAGGCAAAGCAAATTTTCAAACAATTCAAAGTGCCATTAACTCTATTCCAGAACAAAATTCTCAATGGATTCACATCCAAATTTCTCCTGGCGTTTACACAGAACAAGTCCTAATTCCGATGAGCAAACCATGCATTTATCTAGAAGGAGCTGGTAGCCAATTCACCAACATCGAATGGAGTATCCATCCTAATCTTAATGCTACTTTTAATTCCCAAGCAAATAATATTATTGCAAGTGGGATTACTTTCAAGAATACACTCAACGCACCTGTATCAGACGAAATTGCAATCACACAAGCTGTGGCAGCACGAATTCATGGAGATAAATGTGCTTTCTTTAATTGTTCTTTTCTAGGGGTGCAAGACACCTTATATGATGAATATGGTCGTCATTACTACCATAATTGCTATATTCAAGGTGGGATTGATTTCATATTTGGGAATGGTCAGTCAGTATTTGAGGCAAGTGAATTGTTTTTTTCAATGGGTAAAAATGGTCCCAAAAGGAGTGGGTGTTTTACGGCACAAGAAAGGGACTCACCAAATGATCCTAGTGGATTTGTTTTTAAAAATTGCAAATTTACGGGGACAAAAGGAAATGCTATACTAGGGAGATCTTTAAGGGCTTATTCAAGAGTCATCATAACAAACTCATTCCTATCAGACGTGGTAACACCTGTGGGTTGGGGTGCTCGTACCTTTGCTGGCCATGAACAAACTATTACATTTGTGGAGGAGGGAAATACAGGACCAGGGGCAAATAAAGTAAAACGTGCCAAATGGATTAAGCACTTAAGTGGACCGGAACTTGATAAATTCTTAGATATCTCTTTTATTGATAAAGAAGGGTGGATTTCAAAATTGCCATCGAAGATCTTCGTTTGA 1002 0.3782 MQFPQQFLFIFMFSVMIVCNVCESQNCANPPKWVTVSKSGKANFQTIQSAINSIPEQNSQWIHIQISPGVYTEQVLIPMSKPCIYLEGAGSQFTNIEWSIHPNLNATFNSQANNIIASGITFKNTLNAPVSDEIAITQAVAARIHGDKCAFFNCSFLGVQDTLYDEYGRHYYHNCYIQGGIDFIFGNGQSVFEASELFFSMGKNGPKRSGCFTAQERDSPNDPSGFVFKNCKFTGTKGNAILGRSLRAYSRVIITNSFLSDVVTPVGWGARTFAGHEQTITFVEEGNTGPGANKVKRAKWIKHLSGPELDKFLDISFIDKEGWISKLPSKIFV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00166 333 Gene3D - 32 331 IPR012334 -
Cca02g00166 333 PANTHER PECTINESTERASE 5 330 - -
Cca02g00166 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 330 - -
Cca02g00166 333 Pfam Pectinesterase 34 318 IPR000070 GO:0030599|GO:0042545
Cca02g00166 333 SUPERFAMILY Pectin lyase-like 30 326 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00166 Cca-Chr2 3189281 3191745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00166 32 277 Carbohydrate Esterase AT2G19150 49.398 1.24e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00166 - - aprc:113866591 478.018