Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00090 ATGGTTGCGTCAACTCATTCTCCTATTGGATCCTCATATGATTCTAAAGAGAAAATCTGTGAAGATGAAGCACCTTCACTTGTTAACTTAAAGCATCTGAATATAGAACCACGAGAAAGAGTGACAGAGGAAAATGAAATTTTCACCACTTTGCTTTTTGGTAGTTCCATTGTAGTTCATCACTTTATGGTAGAGTTTCTTCCTCCATTGGGAAAAAAAGGTTGTCTTACATGGTGCTATCCTCGTTTCACCTTTGGCCGGAATGTGGATATTATTGACCAAGGAAGAACATCTCCTACAATTGCACGTTTGATTTTTTTTTGCCCTCGGATGTTTTGGAGTACAGAGAACTTAAAAACTGTGGACTGGACCCCTCACAAGGTCACATCTAATTGGAAAATACCTTTGGCTGTTGCAACATTCATTTTGGTGCGAAGACTGTCAGCATGTGAAACTATGGGTTCTGCTACAACAATTTGCAATGATAATACTAGAACTTTGACCTTAAATCAGGAGCTGCGGAGATTATTTTAG 534 0.3876 MVASTHSPIGSSYDSKEKICEDEAPSLVNLKHLNIEPRERVTEENEIFTTLLFGSSIVVHHFMVEFLPPLGKKGCLTWCYPRFTFGRNVDIIDQGRTSPTIARLIFFCPRMFWSTENLKTVDWTPHKVTSNWKIPLAVATFILVRRLSACETMGSATTICNDNTRTLTLNQELRRLF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00090 177 Gene3D - 157 169 IPR023214 -
Cca02g00090 177 Gene3D - 142 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00090 Cca-Chr2 1689675 1692955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00090 143 171 Primary Pumps ATPases AT5G57110 89.655 1.80e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00090 K01537 - vra:106756366 58.5362