Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca02g00083 | ATGGATTGTTCTTCCATTCTTCAATCTTCAAATTCTTCACTCTCCTCAGAATCCTCATTGGGGTCCCCTCATCACCACCTCCCCTTCAACGAAAACGATCCCGAGGAGATGCTTCTCTACGGCATGATCACATCACACCAAGAAGGAACTCGCCCACGCAAAGTAATCAAAGAAGAGGAGGTGAACTCcaacaacaacaaacacaataacaacaacaataacaataaGAGCTTCCGCGGCGTGCGGAAGCGGCCGTGGGGGAAATTTGCGGCCGAGATAAGAGACTCCACCCGGCACGGCATGAGAGTGTGGCTTGGTACGTTCGACAGCGCCGAAGCCGCGGCGCTGGCGTACGACCAGGCCGCATTCTCGGTTAGAGGCTCTAACGCCGTGCTCAATTTCCCCGTTGAGAAGGTGAAGGAGTCTCTAAGGGACATGAATTGTAGCCAAGATGGGTGCTCCCCCATTGTGGCTTTGAAGAGGAGACACTCCCTTGGACGCAAAATGGCTGCCAAAAAGAAGAAGGAGGAAGAAGAGAGTGATGGTGTTAGGCTAGAGAATGTGGTTGTGTTGGAGGACTTGGGGGCAGAGTATTTGGAACACTTGTTGATGATGTCCTCCAATGATACTAGATGCACTTGGTGA | 645 | 0.493 | MDCSSILQSSNSSLSSESSLGSPHHHLPFNENDPEEMLLYGMITSHQEGTRPRKVIKEEEVNSNNNKHNNNNNNNKSFRGVRKRPWGKFAAEIRDSTRHGMRVWLGTFDSAEAAALAYDQAAFSVRGSNAVLNFPVEKVKESLRDMNCSQDGCSPIVALKRRHSLGRKMAAKKKKEEEESDGVRLENVVVLEDLGAEYLEHLLMMSSNDTRCTW | 214 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca02g00083 | 214 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 18 | 205 | - | - | |
Cca02g00083 | 214 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Cca02g00083 | 214 | CDD | AP2 | 78 | 136 | IPR001471 | GO:0003700|GO:0006355 | |
Cca02g00083 | 214 | MobiDBLite | consensus disorder prediction | 65 | 79 | - | - | |
Cca02g00083 | 214 | Pfam | AP2 domain | 78 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
Cca02g00083 | 214 | PANTHER | DNA-BINDING DOMAIN | 18 | 205 | IPR044808 | GO:0003700|GO:0009873 | |
Cca02g00083 | 214 | Gene3D | AP2/ERF domain | 76 | 137 | IPR036955 | GO:0003700|GO:0006355 | |
Cca02g00083 | 214 | PRINTS | Ethylene responsive element binding protein signature | 78 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Cca02g00083 | 214 | PRINTS | Ethylene responsive element binding protein signature | 117 | 137 | IPR001471 | GO:0003700|GO:0006355 | |
Cca02g00083 | 214 | SMART | rav1_2 | 77 | 141 | IPR001471 | GO:0003700|GO:0006355 | |
Cca02g00083 | 214 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Cca02g00083 | 214 | ProSiteProfiles | AP2/ERF domain profile. | 77 | 135 | IPR001471 | GO:0003700|GO:0006355 | |
Cca02g00083 | 214 | SUPERFAMILY | DNA-binding domain | 78 | 137 | IPR016177 | GO:0003677 | |
Cca02g00083 | 214 | MobiDBLite | consensus disorder prediction | 60 | 80 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca02g00083 | Cca-Chr2 | 1518332 | 1519178 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca02g00083 | 6 | 214 | AP2-EREBP Transcription Factor Family | AT3G23240 | 51.556 | 2.07e-70 | 212 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Cca02g00083 | AP2 | 3.1e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca02g00083 | K14516 | - | gmx:100780576 | 269.626 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca03g02199 | 03 | 42723042 | 42723908 | Cca02g00083 | 02 | 1518332 | 1519178 | PCT |