Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00079 ATGGAACGTCGGGTTCTTGATGGAATCATCAATAGGCTGCTTCAGGTGAGAGGGAGACCTGGGAAAGAGGTGCAGCTTTTAGAGGCAGAAATCAGGCAGCTTTGTTTGGTCTCCAGAGATGTCTTTTTGAAGCAGCCCAATTTGTTGGAACTAGAGGCACCAATTAAGATATGTGGAGACATTCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAGCATGGTGGATTCCCTCCTCGCTCCAACTACTTATTCTTAGGGGACTACGTGGATCGTGGAAAGCAAAGCCTTGAGACAATATGTCTTCTTTTGGCCTACAAGATAAAGTACCCTGAGAACTTTTTCATTCTTAGGGGAAACCATGAATGTGCTTCCATAAACCGTGTCTATGGCTTCTATGATGAATGCAAACGAAGATTCAATGTGAGGCTATGGAAAATGTTTGCAGATTGTTTCAACTGTTTGCCTGTGGCAGCTATCATTGATGAAAAAATATTCTGCATGCATGGTGGACTCTCTCCTGAATTGCACAGTCTAAGTCAGATACGTAGTTTGCCACGTCCATTTGAAGTACCTGAAAGTGGTCTACTGTGTGATCTCTTGTGGTCTGATCCTAGTAAACACATTCTGGGTTGGGGAGAGAATGAACGTGGAGTTTCATATACTTTTGGTGCTAGCGTGGTCACAGAATTTCTGGGGAAGCATGACCTTGACTTGATTTGTAGAGCACACCAGGTCTCATAA 744 0.4341 MERRVLDGIINRLLQVRGRPGKEVQLLEAEIRQLCLVSRDVFLKQPNLLELEAPIKICGDIHGQYSDLLRLFEHGGFPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFILRGNHECASINRVYGFYDECKRRFNVRLWKMFADCFNCLPVAAIIDEKIFCMHGGLSPELHSLSQIRSLPRPFEVPESGLLCDLLWSDPSKHILGWGENERGVSYTFGASVVTEFLGKHDLDLICRAHQVS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00079 247 Pfam Calcineurin-like phosphoesterase 54 245 IPR004843 GO:0016787
Cca02g00079 247 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Cca02g00079 247 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 246 - -
Cca02g00079 247 SUPERFAMILY Metallo-dependent phosphatases 18 246 IPR029052 -
Cca02g00079 247 SMART pp2a_7 26 247 IPR006186 GO:0016787
Cca02g00079 247 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Cca02g00079 247 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Cca02g00079 247 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Cca02g00079 247 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Cca02g00079 247 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Cca02g00079 247 PRINTS Serine/threonine phosphatase family signature 236 247 IPR006186 GO:0016787
Cca02g00079 247 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 246 - -
Cca02g00079 247 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Cca02g00079 247 Gene3D - 2 247 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00079 Cca-Chr2 1429749 1433729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00079 20 242 Calmodulin-binding Proteins AT5G63870 30.189 4.79e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00079 K06269 - gmx:100813763 476.863