Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00076 ATGGCTGGACAACTTGGAGTGCTGAATGCACTTGATGTGGCCAAGACACAATGGTACCACTTCACTGCAATTGTTATAGCTGGAATGGGTTTCTTCACTGATGCCTATGATCTTTTCTGCATTTCCCTTGTCACCAAGCTTTTGGGGAGGATATATTACACACAGCCAGGTGCAGCAAAGCCAGGAACTCTTCCTCCAAGAGTTCAATCTTCTGTGACAGGTGTGGCACTATGTGGCACATTAGCTGGCCAACTATTCTTTGGTTGGCTTGGTGACAAAATGGGAAGGAAAAAGGTCTATGGCTTAACTCTTGTCCTCATGGTAGTGTGCTCCATTGCCTCAGGGCTCTCCTTTGGATCAACTCCAAAGGGTGTCATGGCAACACTTTGTTTCTTCAGGTTCTGGCTAGGGTTTGGGATCGGTGGTGACTACCCTCTTTCTGCCACAATCATGTCTGAATACGCCAACAAGAAGACTCGTGGGGCGTTCATAGCAGCAGTGTTTGCCATGCAAGGATTTGGAATCTTGGCTGGTGGAGTAGTTGCCTTGGTTGTTTCATATGCATATGACCAAAAGTACAAGGTTCCTACTTATGAACAAGATCCAGAAGCATCCTTGGTGCCTGCATTTGACTATGTTTGGAGAATAGTTTTGATGTGTGGTGCAGTACCAGCAGCACTCACCTACTACTGGCGCATGAAAATGCCAGAGACTGCACGTTACACAGCCCTTGTGGCCAAGAATGCAAAACAAGCTGCTGCAGACATGTCCAAGGTGTTACAAGTGGAACTTGAAGCTGAAGAGGAAAAGGTGAAGGAATTAACAGAGAATGAGGGCAACAAGTATGGTTTGTTCAGCAAGGAGTTTGTGAAACGCCATGGTTTGCATTTGGTTGGAACCACCACCACTTGGTTCCTTTTGGACATAGCATTCTACAGCCAGAACCTTTTCCAAAAGGACATTTTCAGTGCAATTGGGTGGATCCCTAAAGCACAGGAAATGAATGCAATCCATGAGGTGTATAAGATTGCAAGAGCACAAACACTTATAGCACTGTGCAGCACTGTGCCAGGTTACTGGTTAACAGTGTTGTTTATTGATCGCATGGGCCGTTTTGCTATCCAGCTGATGGGGTTCTTCTTCATGACTGTGTTCATGTTTGCTTTGGCCATACCCTATGATCATTGGACTAAGAAAGCAAACAGAATTGGGTTTGTTGTGATGTACTCTCTCACTTTTTTCTTTGCCAATTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATTTTCCCTGCAAGACTAAGGTCTACTTGTCATGGAATTTCTGCTGCTGCAGGAAAGGCTGGTGCAATTGTGGGTGCATTTGGATTCCTCTATGCTGCACAAAGCAAGGACCCTTCCAAGACTGATGCAGGGTACCCTACAGGTATTGGGATCAAGAACTCCCTTATTATGCTTGGTGTGATCAACTTCATTGGGATGTTGTTTACCTTGATGGTTCCAGAATCAAAGGGAAAATCATTGGAGGAGTTGAGTGGGGAGAATGATGAAAATGATGTTGTGGACACTCACCATGCAGTGTCTGCTAGAACAGCTCCTGTTTGA 1611 0.4538 MAGQLGVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTQPGAAKPGTLPPRVQSSVTGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLVLMVVCSIASGLSFGSTPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALVVSYAYDQKYKVPTYEQDPEASLVPAFDYVWRIVLMCGAVPAALTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEAEEEKVKELTENEGNKYGLFSKEFVKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPKAQEMNAIHEVYKIARAQTLIALCSTVPGYWLTVLFIDRMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPSKTDAGYPTGIGIKNSLIMLGVINFIGMLFTLMVPESKGKSLEELSGENDENDVVDTHHAVSARTAPV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00076 536 MobiDBLite consensus disorder prediction 511 536 - -
Cca02g00076 536 CDD MFS_PhT 24 506 - -
Cca02g00076 536 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Cca02g00076 536 TIGRFAM 2A0109: phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016021
Cca02g00076 536 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 522 - -
Cca02g00076 536 Coils Coil 257 277 - -
Cca02g00076 536 Gene3D MFS general substrate transporter like domains 19 265 IPR036259 -
Cca02g00076 536 Gene3D MFS general substrate transporter like domains 271 530 IPR036259 -
Cca02g00076 536 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Cca02g00076 536 MobiDBLite consensus disorder prediction 511 526 - -
Cca02g00076 536 Pfam Sugar (and other) transporter 24 513 IPR005828 GO:0016021|GO:0022857|GO:0055085
Cca02g00076 536 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00076 Cca-Chr2 1400212 1403880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00076 1 521 Inorganic Solute Cotransporters AT3G54700 80.843 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00076 K08176 - gmx:100780201 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02203 03 42811925 42814458 Cca02g00076 02 1400212 1403880 PCT