Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00065 ATGGAAACTACAAGGAAGTGGTTTAGTAAGTTCAAGCCAAATGATAAAACGAAGTCTGAAAAAAACAAGGAAACTACAGGTGCAACAAAAGAAGGGTCAAAACCTCCATCAAATGATGAGGCACCTTCAAATGTAACCAAACAGAAGGTTGAAGCTGCAAAGCAGTACATAGAAAATCATTATAAGAAGCAGATGCAAAGCCTGCAGGAGAGGAAGGAAAGACGTGATATGCTAGAAAAGAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAACAAAATAACTTGCTTAAGTATTTGGAGAAAAAGGAGAGGGAATACATGCGCCTTCAGAGACATAAGATGGGGGCTGACGACTTTGAGCCCCTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAATCTGCCGGGAGAAGGCTTCCGGTCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAACATGTCAAAGCTGAGAGGAACTTACTTGCTGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAGGAGTATTTATATCTTATAATGGAGTATCTACCTGGGGGAGATATGATGACATTGCTGATGCGGAAGGATATATTGACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTCCTAGCTATAGAGTCAATTCATAAACACAATTACATTCATAGAGATATCAAGCCTGACAATTTGCTGCTAGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAAGAAAAGGACTTCTCTGTTGGAATTAACAGAAGTGGAGCCCTCCAAAGTGATGGCCGTCCTGCGGCTCCTAAACGAACACAACAGGAGCAGCTGCAGCATTGGCAGAAAAATCGACGAATGCTTGCATATTCTACAGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTTCTGAAGAAAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGGTATCCACCTTTTTATTCAGATGAACCGATGTTGACTTGTAGAAAGATAGTAAATTGGAGAACGAATTTAAAATTTCCAGAAGAAGCTAAACTTTCAGCAGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTGGAGATGAGACTTGGAACCAAAGGAGCTGATGAAATAAAGGCTCACCCATGGTTCAATGGTATTGAATGGGACAAATTGTACAACATGAAAGCTGCTTTCATACCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTGGACAAGCAAACTGTACCTTCCTCAAAGGCAGGGCCGTGGAGAAAGATGCTGCCATCTAAAGATATTAACTTCGTTGGCTACACATATAAGAATTTTGAAATCGTGAATGATCATGATATACCAGGAATTGCTGAATTGAAGAAGAAGAACACAAAACCTAAAAGACCATCTATTAAGGCCCTATTCGATGATGAATCAGCTATGAGTGCCAACCAAACTGCCAGAGGGAGCTTCTTAAACCTCTTACCTCCTCAAATGGAAGTTCCTGAAAAAAGTTGGAGTTGA 1641 0.4034 METTRKWFSKFKPNDKTKSEKNKETTGATKEGSKPPSNDEAPSNVTKQKVEAAKQYIENHYKKQMQSLQERKERRDMLEKKLADAEVSEEEQNNLLKYLEKKEREYMRLQRHKMGADDFEPLTMIGKGAFGEVRICREKASGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSVGINRSGALQSDGRPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRTNLKFPEEAKLSAEAKDLICRLLCNVEMRLGTKGADEIKAHPWFNGIEWDKLYNMKAAFIPEVNDELDTQNFEKFEEVDKQTVPSSKAGPWRKMLPSKDINFVGYTYKNFEIVNDHDIPGIAELKKKNTKPKRPSIKALFDDESAMSANQTARGSFLNLLPPQMEVPEKSWS 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00065 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Cca02g00065 546 PANTHER SERINE/THREONINE-PROTEIN KINASE 42 521 - -
Cca02g00065 546 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 42 521 - -
Cca02g00065 546 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00065 546 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca02g00065 546 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00065 546 MobiDBLite consensus disorder prediction 1 50 - -
Cca02g00065 546 Gene3D Transferase(Phosphotransferase) domain 1 203 269 - -
Cca02g00065 546 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca02g00065 546 SUPERFAMILY Protein kinase-like (PK-like) 94 468 IPR011009 -
Cca02g00065 546 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Cca02g00065 546 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Cca02g00065 546 MobiDBLite consensus disorder prediction 1 28 - -
Cca02g00065 546 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Cca02g00065 546 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Cca02g00065 546 CDD STKc_NDR_like 117 482 - -
Cca02g00065 546 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Cca02g00065 546 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Cca02g00065 546 Coils Coil 61 105 - -
Cca02g00065 546 MobiDBLite consensus disorder prediction 29 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00065 Cca-Chr2 1065967 1075982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00065 1 543 AGC Kinase Gene Family AT3G23310 82.051 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Cca02g00065 Pkinase 5.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00065 K08790 - gmx:100795087 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca03g02221 03 43009597 43014642 Cca02g00065 02 1065967 1075982 PCT