Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00054 ATGGGAATAAGAGATTTTCACATCAAGCTCAAGGCATTCCGGGTGAAACGATTTTTCTTTGGTAGAAGGAGAAGCAAATGGAATGCAACCAAGCCTTCATGGATGCTTCCAATATCACATGGTCATCATGTGGTGGAGCATCATGTAATCAAAGGTGGTTCTGTTGACTCAGACTTTGATTCAGTTGTGATACAAAGGGAGCAAATGGATCACACAGAACTGTGGTACTTTGGAATCTTTGATGCTGTAGTTGGAGATGGAGTTACCAAGTACATGCAATCTCATTTCTTTGGCAAGAAGCTCAAAGAGTGTCATATGAGGAGAAAAACCAAAGAAACAATGAAGAGAGCTTACTTAGGTGTAAGAACAAAGATCAGAGAGGCATACAAGCCAGAGGAGGAGACATACAGAATAGGTTCAACATCAGTGATGGTGATAAATGGAGAAAACCTTGTGATAGCCAACATGGGAGATTACAGAACTGTTCTGTGCAGAAATGGTGTAGCTTATCAGACCAGTGGCAGACACAATCTAACTGCCAAGAGACATTGGTATCGCAGACTCTTTTCAGCACGCATGATAGCATGTGAATCAGGCAATAAAACAGGTGCAAAGCATTCTAAAGGCTCAGAACTTGTGCTGGGAGGTGACAGGATCGACTCTGATACTGAATTTTTGATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAGGCTGTGAATCTTATAAGACACATAGAGGATCCACAAGAAGCAGCTGAGTGCTTGGCAAAGGAAGCTATGATTAGGATGAGCAAAAGCAACATTTCATGCTTAGTCATTCGCTTTGACTGA 843 0.4199 MGIRDFHIKLKAFRVKRFFFGRRRSKWNATKPSWMLPISHGHHVVEHHVIKGGSVDSDFDSVVIQREQMDHTELWYFGIFDAVVGDGVTKYMQSHFFGKKLKECHMRRKTKETMKRAYLGVRTKIREAYKPEEETYRIGSTSVMVINGENLVIANMGDYRTVLCRNGVAYQTSGRHNLTAKRHWYRRLFSARMIACESGNKTGAKHSKGSELVLGGDRIDSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEAMIRMSKSNISCLVIRFD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00054 280 Gene3D - 47 280 IPR036457 -
Cca02g00054 280 PANTHER ALPHABET, ISOFORM E-RELATED 6 279 - -
Cca02g00054 280 Pfam Protein phosphatase 2C 219 272 IPR001932 -
Cca02g00054 280 Pfam Protein phosphatase 2C 75 178 IPR001932 -
Cca02g00054 280 CDD PP2Cc 60 279 IPR001932 -
Cca02g00054 280 SMART PP2C_4 46 277 IPR001932 -
Cca02g00054 280 ProSiteProfiles PPM-type phosphatase domain profile. 56 279 IPR001932 -
Cca02g00054 280 SUPERFAMILY PP2C-like 64 280 IPR036457 -
Cca02g00054 280 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00054 Cca-Chr2 815343 818065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00054 1 279 PP2C-type Phosphatase Gene Family AT3G23360 47.163 9.95e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00054 K19704 - gmx:100794054 505.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca02g00054 02 815343 818065 Cca02g00054 02 815343 818065 ECH