LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cca02g00022	aTGAGTTGGTTTCCTTGCTCCATATTGGGTGGCACTACTACTATAAGCTTATTCCCCCGAATTTCTGTTCCTCCTAATCCTAATCCTAATCCCTTTTATTTATCATCGTCAACGCTCATCACTCCCACAACCCTCTCTATTTCTCTCATCGCCAGAAGGTTTTCATTCTCACCCGTTTCAGCCATGGATAAGCAAGACGAAGCCACGGAGCAAGAATACGCACTTCACTCCAACTTGCTTCAAGAATTCACCGCCATCTCCGCCATCGACAAGGCATGGCTCTTCAAATCCCACACCGCCTCGGCTTCGCAGGCAATGTTCTGCGTTAGTCAACCGAACCTTTTGGTCAACAAGAGGAAGAAATCCGTCGTCTCCGCCGCCGTTCTCAGACAAAACGACGGCTCCGTCGCGTTTCAGTGGGCTCCGTTTCCGATCGAAATGTGCGGAGTCTCCGCTGTGGTTCCGTCACCTTCTGGCTCCAAGCTTCTGATTGTCCGAAATCCCGAGAGTGAAGGTCCTTGCCGCTTGGAAATTTGGAGCTCCTCTCAACTCGAGAAGGAGTTCCATATCCCCCAATCCAAGCATGGTTCCGTATACGCTGATGGATGGTTTGAGGGAATTTCTTGGAATTCAGATGAAACCTGTATAGCGTACGTAGCTGAAGAGCCATCCCCTGCAAAGCCTACATTCAATGATCTGGGTGGCTACAAGAAAGGTGGTTCTCCAGACAAGGATAGTGGTACCTGGAAAGGTCAAGGGGAATGGGAGGAGGACTGGGGAGAGACATATTCTGGGAAGAGGCAGCCTGCACTTTTTGTCATCGACATAACCAGTGGAGAGGTACAAGCTGTGAAAGGAATTGACAAGTCTTTGAGTGTGGGACAAGTTGTATGGGCTCCATCAACTGAAGGCTCTGCACAGTATTTGGTTTTTGTTGGATGGTCATTTGAGACGAGAAAACTTGGTATTAAGTACTGCTATAACAGGCCGTGTGCGTTATATGTTGTTAAAGCACCACATCATGAGTCAAAAGCTGATATTCACTCGACTGAAGATGTTCAGGCTGTTAACCTAACTCAAACCATAAGTAGCGCTTTCTTTCCACGGTTCAGCCCAGATGGAAATTTTCTTGTATTTGTATCTGCAAGAAGCTCAGTTGATTCTGGAGCCCATTCTGCTACTGATTCACTTCATAGAATTGATTGGCCTAAAGATACAAAGCTTTATCAATCTGCTAATATTCATGAAGTGATTCCAGTTGTGTTGTTTGCTGAGGATGGCTGCTTCCCTGGGCTTTACTGTTCAACTATCCTTAGTGATCCATGGCTTTCCGATGGCTACACTTTGGTTATAGCTTCTATCTGGCACAGCAGTCAAGTTTTACTTTCCGTCAATGTGTTAAGTGGAGAAATATTGCGTATCACCCCTGCTGACTCAAATTTCTCTTGGAGTCTCCTTACATTGGATGGGAACGATATTCTTGCTGTTTCTAGCAGTCCAGTAGATGTTCCTCAAATCAAGTATGGAGCCATTGTTGAGAAGGCAGCTAATAATAGCAAAGAATGGAGTTGGTCAGATGTCTCAAATCCCATATTTAAATGCTCTGAGAAGGTTAGATCCTTGATCTCCTCTCTTACATTCAGTGTAATGAAGATCTCAGTCAAGGATGTTTCTGAAAACTTAACAAAAGGTGCTAGCCAACCTTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGATGCATGCGATCCACTAATTGTGATCCTTCATGGGGGACCACACTCTGTCTCATTGTCAAGCTTTTCAAAGCCATTGGCTTATCTTTCTTCACTTGGATATAGCTTGTTAATTGTGAACTACAGAGGCTCATTAGGATTTGGTGAGGAAGCCTTGCAGTCTCTTCCGGGGAAAGTTGGGTCTCAGGATGTCAACGATGTACTCACTGCTATTGATCATGTCATTAAATTGGGACTTGCCAGTCCTTCAAAGATTGCTGTGCTCGGAGGCTCACATGGTGGCTTTCTGACAACCCACTTGATTGGCCAGGCACCAGAGAAATTTGTTGCAGCAGCTGCTAGAAATCCTGTTTGTAACCTTGCACTGATGGTCGGTACAACTGATATCCCTGATTGGTGCTATGTGGAGACCTATGGAACCAAGGGGAGAGATAAGTTTACTGAAGCACCTTCAGCAGAGGATCTAACTCAATTTTATGGCAAATCTCCTATTGCACACCTCTCAAAGGTAAAAACACCAACGCTTTTTCTACTAGGTGCCCAAGATCTCCGTGTTCCAATTTCGACAGGACTGCAATATGCTCGCGCTTTAAGGGAGAAAGGAGTACAGGTCAAAGTCATCGTGTTTCCAAATGATGTTCACGGAATAGACAGGCCACAATCCGACTTTGAAAGCTACCTTAGCATTGCGATTTGGTTCAACAAGTATTGCAAATGA	2460	0.4488	MSWFPCSILGGTTTISLFPRISVPPNPNPNPFYLSSSTLITPTTLSISLIARRFSFSPVSAMDKQDEATEQEYALHSNLLQEFTAISAIDKAWLFKSHTASASQAMFCVSQPNLLVNKRKKSVVSAAVLRQNDGSVAFQWAPFPIEMCGVSAVVPSPSGSKLLIVRNPESEGPCRLEIWSSSQLEKEFHIPQSKHGSVYADGWFEGISWNSDETCIAYVAEEPSPAKPTFNDLGGYKKGGSPDKDSGTWKGQGEWEEDWGETYSGKRQPALFVIDITSGEVQAVKGIDKSLSVGQVVWAPSTEGSAQYLVFVGWSFETRKLGIKYCYNRPCALYVVKAPHHESKADIHSTEDVQAVNLTQTISSAFFPRFSPDGNFLVFVSARSSVDSGAHSATDSLHRIDWPKDTKLYQSANIHEVIPVVLFAEDGCFPGLYCSTILSDPWLSDGYTLVIASIWHSSQVLLSVNVLSGEILRITPADSNFSWSLLTLDGNDILAVSSSPVDVPQIKYGAIVEKAANNSKEWSWSDVSNPIFKCSEKVRSLISSLTFSVMKISVKDVSENLTKGASQPYEAIFVSSKTKKSDACDPLIVILHGGPHSVSLSSFSKPLAYLSSLGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLTAIDHVIKLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVETYGTKGRDKFTEAPSAEDLTQFYGKSPIAHLSKVKTPTLFLLGAQDLRVPISTGLQYARALREKGVQVKVIVFPNDVHGIDRPQSDFESYLSIAIWFNKYCK	819

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cca02g00022	819	PANTHER	ENZYME-LIKE PROTEIN, PUTATIVE-RELATED	67	819	-	-
	Cca02g00022	819	SUPERFAMILY	alpha/beta-Hydrolases	580	818	IPR029058	-
	Cca02g00022	819	MobiDBLite	consensus disorder prediction	229	257	-	-
	Cca02g00022	819	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	67	819	-	-
	Cca02g00022	819	Pfam	Prolyl oligopeptidase family	602	818	IPR001375	GO:0006508\|GO:0008236
	Cca02g00022	819	SUPERFAMILY	DPP6 N-terminal domain-like	148	505	-	-
	Cca02g00022	819	Gene3D	alpha/beta hydrolase	562	817	IPR029058	-
	Cca02g00022	819	Pfam	WD40-like Beta Propeller Repeat	365	388	IPR011659	-
	Cca02g00022	819	Pfam	Acylamino-acid-releasing enzyme, N-terminal domain	69	343	IPR045550	-
	Cca02g00022	819	ProSitePatterns	Prolyl endopeptidase family serine active site.	647	677	IPR002471	GO:0004252\|GO:0006508

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cca02g00022	586	802	Carbohydrate Esterase	AT5G36210	26.728	5.86e-18	87.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cca02g00022	K01303		-	gmx:100803600	1419.83