Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00016 ATGGCAGGGATGATGAGGATTGTGAGGAAGACAAGCATATCCCTAAAGAGCACTTGGATTAAGTTCGATGGAAATGGTCTTCATTCCTCACTTGATATGGACAAGTATGATCTCATGCGTCGGGTTCACATAGATGCCCGTGATTTCAGAATTCTTGATCCTCTTCTCTCTTACCCCTCTACCATTCTAGGTCGAGAAAAGGCTATTGTTCTTAACTTAGAGTATATCAAGGCAATCATCACTGCTAATGAGGTGCTTTTGCTAGACTCAACGGATCAAAATGTGGTCTCTGTAGTTGAGGAACTAAAAAGGAGGTTAACTATCACGGAAACAAATCAAGGGGTCGGTCAAGACAATACCGAACCCTTTGAATTCAGGGCCCTCGAGGTAGTTTTGGAAGCAATTTGTAGTTTCCTTGATGCACGCACAACTGAACTTGAAATGGATGCTTATCCCGCATTGGATGAACTTACCACCCAGATAAGTAGCCGTAATTTGGAAAGAGTTCGAAAATTGAAGAATACAATGACGGGGCTGGTTGCCAGGGTTCAAAAGGTAAAAGATGAGCTTGAACAGTTAATGGACGATGACGATGGCATGGCTGATCTATACTTATCAAGAAAATCATCAGGCACATTATGTTGGTCTGCCACGGCCCCCACCATAGAATCAAAATTATCCAGTGCTAGTAATAGAGCAAGTGTGGCACTTTATCTCGGAGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTGGAGGCTTATTTCATGCAAGTTGAGGGCACATTGAACAGATTGAACACGCTACGAGGGTATATCGACGACACTGAAGATTATATTAATATTCATATTGACAACCATCGAAATCGGCTGATTCAGTTAGAGCTATTTCTTTCCTCAGCAGACCTTTCTCTTTCATTTTTAGCTTTGGTGTGTGGACTGTTTGGCATGAGTATTCCATACACTTGGAATCAAGACCATGATTACATGTTCAAATGGTTACCTACGCTCGCAAAAGAGGATTGCTTGGATCTTGAGCATGTGAATCATTCAGCTGAATGA 1062 0.4171 MAGMMRIVRKTSISLKSTWIKFDGNGLHSSLDMDKYDLMRRVHIDARDFRILDPLLSYPSTILGREKAIVLNLEYIKAIITANEVLLLDSTDQNVVSVVEELKRRLTITETNQGVGQDNTEPFEFRALEVVLEAICSFLDARTTELEMDAYPALDELTTQISSRNLERVRKLKNTMTGLVARVQKVKDELEQLMDDDDGMADLYLSRKSSGTLCWSATAPTIESKLSSASNRASVALYLGDENDVEELEMLLEAYFMQVEGTLNRLNTLRGYIDDTEDYINIHIDNHRNRLIQLELFLSSADLSLSFLALVCGLFGMSIPYTWNQDHDYMFKWLPTLAKEDCLDLEHVNHSAE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00016 353 Coils Coil 169 196 - -
Cca02g00016 353 PANTHER MAGNESIUM TRANSPORTER MRS2-I 17 335 - -
Cca02g00016 353 Gene3D - 4 90 - -
Cca02g00016 353 Gene3D Magnesium transport protein CorA, transmembrane region 91 291 - -
Cca02g00016 353 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 17 335 IPR039204 -
Cca02g00016 353 CDD Mrs2_Mfm1p-like 19 333 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00016 Cca-Chr2 227458 232659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00016 16 334 MRS2 Gene Family AT5G64560 64.058 9.57e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00016 K16075 - han:110910496 416.772