Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca02g00007 ATGGACACGTCTCTGGTGTTTACAGTACGAAGGCGTGATCCAGAGTTGATAGCCCCGGCGAAGCCCACTCCTCGCGAAGTGAAGCTTCTGTCAGACATAGATGACCAAGATGGCCTTCGTTTCCAAATTCCAGTGATACAGTTCTATCGCAAGGAGGCTTCACAGGAAGGGAAGGACCCTGTTGAGGTGATTAGAGAGGCTGTGGCGAAAACGCTTGTGTTTTACTATCCTTTTGCAGGTAGGCTTAGGGAAGGGCGTGGTCGGAAACTGATGGTGGATTGCACTGGAGAAGGTGTTTTGTTCATTGAGGCTGATGCTGATGTCACTCTTAACCAGTTTGGTGATGCTCTTCAACCTCCCTTTCCATGTTGGGAAGAACTCCTTTATGATGTTCCCGGCTCTGGAGATGTCCTTAACACTCCTCTCTTGCTCATACAGGTAACGCGTCTCAAGTGCGGCGGCTTCATTCTGGCTCTCCGGCTGAACCACACTATGAGCGACGCAGCAGGTTTGGTCCAATTCATGAGCGCATTAGGCGAAATAGCACGCGGGATGCACCAACCTTCCATCCTACCTGTGTGGAGGAGAGAGCTTCTAAACGCGAGGGACCCACCAAGAGTGACATGCACCCACCGCGAGTACGAACAAGTGCCCGACACCAAAGGAACCATCATCCCCTTAGACGACATGGCTCACCGCTCTTTCTTCTTCGGCCCCACCGAAGTCGCCGCCATTCGCCATCTCATTCCGCCTCACCAACGCCAATGCTCTAACTTCGAGCTCCTCACCGCATGCCTCTGGCGCTGCCGCACCATAGCGCTGCAGCCTGAAAGAGACGAAGAGGTTCGCATTCTCTGCATCGTTAACGCCCGTGCCAAGTTTGACCCTCCCTTACCAACCGGTTACTACGGCAATGCTTTTGCGTTTCCCGTGGCAGTTACTAGTGCGGGGAATCTGTGTGAGAATCCGTTGGGATATGCTTTGGAGTTGGTGAGGAAAGCGAAAGCGGATGTGAGTGAGGAATATATGCACTCGTTGGCGGATTTAATGGTCACCAACGGACGACCTCACTTTACCGTGGTGAGGTCGTATCTTGTGTCGGATGTGACGCGTGCTGGGTTCGGAGAAGTTGACTTTGGGTGGGGAAAGGCTGTCTATGGAGGACCGGCGAAGGGAGGAGTTGGAGCCATACCTGGTGTTGCTAGCTTTTACATTCCCTTTAAAAATGCTAAAGGAGAGGAAGGGTTGGTGATTCCGGTTTGTTTGCCATCTGAAGCCATGGAGAGGTTTGTAAAGGAGCTGGACAACGTGCTTAACAATCACATCCAACCTACCAAGGGTGGTTCAAAATCTGGCTTCATCATTTCTTCCTTGTAG 1377 0.52 MDTSLVFTVRRRDPELIAPAKPTPREVKLLSDIDDQDGLRFQIPVIQFYRKEASQEGKDPVEVIREAVAKTLVFYYPFAGRLREGRGRKLMVDCTGEGVLFIEADADVTLNQFGDALQPPFPCWEELLYDVPGSGDVLNTPLLLIQVTRLKCGGFILALRLNHTMSDAAGLVQFMSALGEIARGMHQPSILPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIIPLDDMAHRSFFFGPTEVAAIRHLIPPHQRQCSNFELLTACLWRCRTIALQPERDEEVRILCIVNARAKFDPPLPTGYYGNAFAFPVAVTSAGNLCENPLGYALELVRKAKADVSEEYMHSLADLMVTNGRPHFTVVRSYLVSDVTRAGFGEVDFGWGKAVYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPSEAMERFVKELDNVLNNHIQPTKGGSKSGFIISSL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca02g00007 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
Cca02g00007 458 Gene3D - 215 434 IPR023213 -
Cca02g00007 458 Pfam Transferase family 10 434 - -
Cca02g00007 458 Gene3D - 5 214 IPR023213 -
Cca02g00007 458 PANTHER - 8 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca02g00007 Cca-Chr2 105334 114795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca02g00007 9 434 Monolignol Biosynthesis Gene Families AT5G48930 29.730 1.76e-51 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca02g00007 K19861 - gmx:100797017 813.527