Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02453 ATGCCATTTCACTATACTGGGACGTTGCTTGATGGGCGCAAGTTTGATTCCAGCAGAGACAGGGGAACTCCATTCAGTTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGTGATCAAGGTATTATAACAATGAAGAAAGGTGAGAATGCCCTTTTCACCATCCCAGCTGAGCTAGCTTATGGTGAATCTGGTTTTCCTTCAAAGATTCCTCCCAATGCAACTCTTCAATTTGACGTGGAGCTTCTGTCTTGGACTTAG 261 0.4406 MPFHYTGTLLDGRKFDSSRDRGTPFSFTLGQGQVIKGCDQGIITMKKGENALFTIPAELAYGESGFPSKIPPNATLQFDVELLSWT 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02453 86 Gene3D - 1 86 IPR046357 GO:0003755
Cca01g02453 86 PANTHER PEPTIDYLPROLYL ISOMERASE 3 86 - -
Cca01g02453 86 SUPERFAMILY FKBP-like 3 85 - -
Cca01g02453 86 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 86 IPR001179 GO:0003755
Cca01g02453 86 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 3 83 IPR001179 GO:0003755
Cca01g02453 86 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02453 Cca-Chr1 53722887 53724424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02453 4 85 Calmodulin-binding Proteins AT5G48570 82.927 3.28e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02453 K09571 - gmx:100803189 160.229