Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02452 ATGAGGTTCCGACATTCCGTTCCTATTCTTCTCTTCTTCCTCTTCGTTTCGGCATTAGTTTGTGCGAAGAAAACCGGGGATGTGACGGAGTTGCAAATTGGCGTGAAGCATAAACCAGCAACATGTGAAGTTCAGGCACACAAAGGAGATAAAGTCAAAGTACACTATCGGGGAAAACTCACCGATGGAACTGTGTTTGATTCTAGCTTTGAAAGAAATAATCCAATTGATTTTGAGCTTGGTAGTGGTCAAGTGATCAAAGGGTGGGACCAGGGTTTATTGGGAATGTGTCTTGGTGAGAAGCGGAAGCTGAAAATACCAGCAAAACTTGGTTATGGAGAGCAGGGTTCCCCACCCACTATTCCAGGTGGTGCAACACTTATATTTGACACTGAGCTTGTGGGAGTGAACGACAAAAGTTTAAACGAAGAAAAACAAAACTCCGAACTGTAG 453 0.4371 MRFRHSVPILLFFLFVSALVCAKKTGDVTELQIGVKHKPATCEVQAHKGDKVKVHYRGKLTDGTVFDSSFERNNPIDFELGSGQVIKGWDQGLLGMCLGEKRKLKIPAKLGYGEQGSPPTIPGGATLIFDTELVGVNDKSLNEEKQNSEL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02452 150 SUPERFAMILY FKBP-like 31 140 - -
Cca01g02452 150 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 9 146 - -
Cca01g02452 150 Gene3D - 17 137 IPR046357 GO:0003755
Cca01g02452 150 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Cca01g02452 150 PANTHER - 9 146 IPR044609 GO:0000413|GO:0003755|GO:0061077
Cca01g02452 150 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 43 134 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02452 Cca-Chr1 53713765 53717910 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02452 24 134 Calmodulin-binding Proteins AT3G25230 52.632 5.08e-30 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02452 K09569 - gmx:100305479 277.715