Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02449 ATGAGATGCACGAGTTCGCTTTGGGGCCATTGCAAGGGTCTTGGTTTCAGTGGGTTTTGGGTGGGTGGGATGAATCACGGGCTGGGTTTTTATAGGAGGCAAGTTATTAAAGGATGTGATCAAGGTATTATAACAATGAAGAAAGGTGAGAATGCCCTTTTCACCATCCCAGCTGAGCTAGCTTATGGTGAATCTGGTTTTCCTTCAAAGATTCCTCCCAATGCAACTCTTCAATTTGACGTGGAGCTTCTGTCTTGGACTTAG 264 0.4508 MRCTSSLWGHCKGLGFSGFWVGGMNHGLGFYRRQVIKGCDQGIITMKKGENALFTIPAELAYGESGFPSKIPPNATLQFDVELLSWT 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02449 87 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 33 84 IPR001179 GO:0003755
Cca01g02449 87 SUPERFAMILY FKBP-like 31 86 - -
Cca01g02449 87 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 33 87 - -
Cca01g02449 87 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62 33 87 - -
Cca01g02449 87 Gene3D - 18 87 IPR046357 GO:0003755
Cca01g02449 87 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 87 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02449 Cca-Chr1 53683715 53688698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02449 34 86 Calmodulin-binding Proteins AT3G25230 83.019 1.74e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02449 K09571 - gmx:100803189 102.064