Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02437 ATGGATCCTGCTACGTATGTCCACACTATTGCAGGAATAATCTTAGCTTTGTTAATTGCATACACAGTGCTTAAGTCCCCTAATGGGTCTAAACACAAAAAGGGTAACAAAGTACCCGAACCTCGTGGTGCTTTACCTCTCATAGGTCACCTCCATCTTCTTAACGCTAAAATACCCTATTTTAGAACCTTTTCAATCATGGCTGAGAAATATGGTCCAATTTTTTCTGTCAAATTGGGTTGCCACCCCACCTTAGTGGTGAATAGCAGGGAAATTGCCAAGGAGTGTCTCACAACAAATGACAAAGTTTTTGCCTCAAGACCTGACACATCTGCAGGGAGAATCATAGGTTACAACAATGCAGTGTTTGGCCTTTCTCCTTATGGAGACTATTGGCGTGAAATGAGAAGAATTTCCACTCTTGAGATTTTCTCAAGACACAGGCTTGAAAAGCTAAAGCATGTGAGAGACACCGAAATATTCTCTCTTGTCAAAGACTTGTACTCGTTAGCAAAGAATGGGAAGGGTTCAAGTGTAGTTCCTATAAGCAAGTTATTGGAGCACACAACCTTCAATATAATTGTGAGGATGATTGCTGGGAAGAGATTTGAAGGGAACACTATTAATGAAGAAGATAATGAAGCATGGAGGCTAAGGAAGGCCATAAAAGATGCCACATATCTATGTGGTGTTTTTGTGGCAGCTGATGCTATTCCTTCCCTTAGTTGGTTTGATTTTCAAGGGCACGTAGGTTTCATGAAGAGGACTGCTAAGGACATGGACATTATTCTTGACAAGTGGCTGGAAGAACATGTCAGAAAGAGAGGTGAGGATGAGAATGGTAGTTGCGAAAGCGACTTCATGGATGTGATGATATCAACTTTCCAAGGGCAAGAAGAAATTTGTGGCTATAAGCGGAACATAGTTATCAAAGCAACATCGGTGCTCCTTATTCTCACTGGGTCAGGAAGCACAGCCATAACACTAACATGGGCATTGTCCTTACTCGTAAACCATGGAAAGGTCCTGAAGAAAGCCCAAGAAGAATTGGACAGGCATGTAGGAAAAGAAAGATGGGTGGAAGAATCAGACATAAAAAAGCTAAGTTATCTTGATGCCATAATCAAAGAGACCCTACGTTTGTACCCACCAGCCCCCTTAACCGGAATTAGGGAAGTGATGGAGGATTGTTGTGTGGCAGGGTACCATGTGTCAAAGGGAACACGTTTGCTTATTAACCTATGGAACTTGCAAAGGGACCCACAAGTATGGCCTAATCCTAATGAATTTCAACCAGAGAGGTTCCTCACCACTCATCAAGACATTGAGTTTATGAGTCAAAACTTTGAGTTAATCCCATTTAGCTTTGGAAGAAGGTCATGCCCTGGCATGACATTTGGGTTGCAAGTGTTGCACTTGACTCTGGCTCGCTTGCTTCAAGGCTTTCACATGTGCACTAAGGATGCTCTTCAGGTTGATATGACTGAAGGCTTAGGAGTTGCCTTGCCTAAGGAACATGCCCTTCAACTTATCCTCAAACCACGTCTTCCACTCCACCTTTATGAAACCCTTTAA 1575 0.4254 MDPATYVHTIAGIILALLIAYTVLKSPNGSKHKKGNKVPEPRGALPLIGHLHLLNAKIPYFRTFSIMAEKYGPIFSVKLGCHPTLVVNSREIAKECLTTNDKVFASRPDTSAGRIIGYNNAVFGLSPYGDYWREMRRISTLEIFSRHRLEKLKHVRDTEIFSLVKDLYSLAKNGKGSSVVPISKLLEHTTFNIIVRMIAGKRFEGNTINEEDNEAWRLRKAIKDATYLCGVFVAADAIPSLSWFDFQGHVGFMKRTAKDMDIILDKWLEEHVRKRGEDENGSCESDFMDVMISTFQGQEEICGYKRNIVIKATSVLLILTGSGSTAITLTWALSLLVNHGKVLKKAQEELDRHVGKERWVEESDIKKLSYLDAIIKETLRLYPPAPLTGIREVMEDCCVAGYHVSKGTRLLINLWNLQRDPQVWPNPNEFQPERFLTTHQDIEFMSQNFELIPFSFGRRSCPGMTFGLQVLHLTLARLLQGFHMCTKDALQVDMTEGLGVALPKEHALQLILKPRLPLHLYETL 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02437 524 Gene3D Cytochrome P450 22 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 SUPERFAMILY Cytochrome P450 39 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PANTHER CYTOCHROME P450 82G1 14 522 - -
Cca01g02437 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 Pfam Cytochrome P450 39 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02437 524 PANTHER CYTOCHROME P450 82C3-RELATED 14 522 - -
Cca01g02437 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02437 Cca-Chr1 53480935 53487232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02437 38 521 Cytochrome P450 AT4G31940 51.016 3.42e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02437 K17961 - gmx:100787489 867.84