Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02436 ATGATAGCTGGGAAGAGATTTGGAGGAGACACATTTAATGAAGAAGATAATGAAGCATGGAGGCTAAGGAAGGCCATAAAAGATGCTACATATCTATTTGGTGTTTTTGTTGCGGCTGATGCTATTCCATTCCTTAGTTGGTGTGATTTTCAAGGGCACGTGAGTTTCATGAAGAGGACTGCTAAGGACATGGACATTATTCTTGACAAGTGGCTGGAAGAACATGTCAGAAAGAGAGCTGAGGATGAGAATGGCAGTTGTGAAAGCGATTTCATGGATGTGATGATATCAACTTTCCAAGACCAACAAGAAATCTGTGGCTATAAGCGGGAAATAGTTATCAAAGCAACATCCATGTTCCTTATTCTTACTGGGTCAGGAAGCACAGCCATAACACTAACATGGGCACTCTCCTTACTCCTAAACCATGGAAAGGTCCTAAAGAAAGCCCAAGAAGAATTGGATAAGCATGTAGGAAAAGAAAGATGGGTGGAAGAATCAGACATAAAAAAGCTAAGTTATCTTGATGCCATAATCAAAGAGACCCTACGTTTGTACCCACCAGCCCCCTTAACCGGAATTAGGGAAGTGATGGAGGATTGTTGTGTGGCAGGGTACCATGTGTCAAAGGGAACACGTTTGCTTATTAACCTATGGAACTTGCAAAGGGACCCACAAGTATGGCCCAATCCTAATGAATTTGAACCAGAGAGGTTCCTCACCACTCATCAAGACATGGAGTTTATGAGTCAAAACTTTGAGTTAATCCCATTTAGCTTTGGAAGAAGGTCATGCCCTGGAATGACATTTGGGTTGCAAGTGTTGCACTTGACTCTGGCTCGCTTGCTTCAAGGCTTTCACATGTGCACTAAGGATGCTCTTCAGGTTGATATGACTGAAGGCTTAGGACTCGCCTTGCCTAAGGAACATGCCCTTCAACTTATCCTCAAACCACGTCTTCCACTCCACCTCTATGAAACCCTTTAA 987 0.4306 MIAGKRFGGDTFNEEDNEAWRLRKAIKDATYLFGVFVAADAIPFLSWCDFQGHVSFMKRTAKDMDIILDKWLEEHVRKRAEDENGSCESDFMDVMISTFQDQQEICGYKREIVIKATSMFLILTGSGSTAITLTWALSLLLNHGKVLKKAQEELDKHVGKERWVEESDIKKLSYLDAIIKETLRLYPPAPLTGIREVMEDCCVAGYHVSKGTRLLINLWNLQRDPQVWPNPNEFEPERFLTTHQDMEFMSQNFELIPFSFGRRSCPGMTFGLQVLHLTLARLLQGFHMCTKDALQVDMTEGLGLALPKEHALQLILKPRLPLHLYETL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02436 328 Pfam Cytochrome P450 11 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PANTHER CYTOCHROME P450 82G1 1 326 - -
Cca01g02436 328 Gene3D Cytochrome P450 1 321 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 SUPERFAMILY Cytochrome P450 7 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PANTHER CYTOCHROME P450 82C3-RELATED 1 326 - -
Cca01g02436 328 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 258 267 IPR017972 GO:0005506|GO:0016705
Cca01g02436 328 PRINTS P450 superfamily signature 265 276 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS P450 superfamily signature 256 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS P450 superfamily signature 124 141 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS P450 superfamily signature 177 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS E-class P450 group I signature 255 265 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS E-class P450 group I signature 265 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS E-class P450 group I signature 217 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02436 328 PRINTS E-class P450 group I signature 133 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02436 Cca-Chr1 53466515 53472104 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02436 1 325 Cytochrome P450 AT4G31970 50.303 2.07e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02436 K17961 - gmx:100787489 571.622