Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02435 ATGGATTTCCTTTCACAACCAACAATCATAGTGATAGCCATAAGCATAGTGCTTCTCTACACCACATGGAGGAAGAAAAGCACTAGTCAGAAACTGAAGGGTCTACAACCCCCAGAACCCTCACGTGCCCTACCTTTAATAGGTCACCTCCACTTGCTAGGAAGCCAAACACCCCTTGCAAGAATCTTTGGTTCTTTGGCCGACAAACATGGCCCAATCTTCCAAATCCGTCTAGGAGCATACCCTGCCCTCGTGATTTCAAACCAAGAGGCAATAAAAGAATGTTTCACCACTAATGATAAAGTCTTGGCCTCACGCCCCAAGTCAAGCCATGGTGTTCACCTTGGCTACAATTTTGCAGGCTTTGGATTTGCCCCTTATGGAAGATATTGGATCAAGCTTAGGAAACTTACCATGCTTGAATTGCTCTCGGCTCGCCGACTCGAACTTCTGAGGCATGTCTATGAATCTGAAGTTGATACTTTGATAAGGGATCTTGGCATGTATGTTCCAGACAACACTGCTGTTAAGGTCACAATAAGTCAATGGTTGGAACGCTTAACCTTCAACATGATCACAAAGATGATTGCAGGGAAAAGGTATTTCAGTTATTTGCAAGATGTGGATGATGTAGAGGCACATGGTATTGTGAAACTTATAAAGGAGTTCATGCATATATCTGGGGAGTTTGTTCCCTCGGATTTGATTCCACTTCTTGGATGGTTTGGTGTGCATGGCCAAGTGCTCAAATCTATGAAACGAATTGCAAAAGATTTGGACACACTTGTGGGAGGTTGGGTTGAGGAGCATAAGAAGAGTGATCCTCTGACCAACAAGTCATGGGAGAAACATGATTTCATTGATGTCATGCTCTCTGTTATTGAAGATGATCCTGTCTCTGGCCACACCCGTGATACTATCATCAAAGCAAATGTTATGAACCTTATGTTAGCGGGATCAGACACAACATCGACCACAATGACATGGATACTGGCGATGCTAATGAAGAATCCTGAAGCTTTGAAACGTGCACAAGAGGAGGTTGAGCATCACGTGGGTAGGGATAGAAGAGTGGAAGCACAAGACATAAAGAATTTGGTTTACTTGCAAGCAATTGTGAAGGAAACGTTGAGGTTATACCCACCAGGGCCACTTTTGGTACCCCACGAGGCTATGGAAGATTGTCACATTCAGGGCTATAGTGTGCCAAAAGGAACACGTGTGTTTGCCAATGTGTGGAAACTACATAGAGATCCAAGGCTTTGGTCAGAGGCAGAGAAGTTTTCACCCGAGAGGTTTATGAATGAGAATGGAGAAGTGGATGAAGGGCACAATTTTGAGTATTTGCCTTTTGGGTCGGGGAGAAGAGCTTGCCCTGGATCCACTTTTGCCACACAAGTGAGCCTCGTGACACTTGCTCGTTTGCTTCAAGCCTTTGATTTGGCTGAGCCAGTGGATGAACCTGTTGACTTGAAAGAAGGGTTGGGCATCACCTTGCCCAAGATGACTCCATTGAAAATTCTTATCACCCCGCGATTACCACGTCAATTTTATCATTga 1560 0.4449 MDFLSQPTIIVIAISIVLLYTTWRKKSTSQKLKGLQPPEPSRALPLIGHLHLLGSQTPLARIFGSLADKHGPIFQIRLGAYPALVISNQEAIKECFTTNDKVLASRPKSSHGVHLGYNFAGFGFAPYGRYWIKLRKLTMLELLSARRLELLRHVYESEVDTLIRDLGMYVPDNTAVKVTISQWLERLTFNMITKMIAGKRYFSYLQDVDDVEAHGIVKLIKEFMHISGEFVPSDLIPLLGWFGVHGQVLKSMKRIAKDLDTLVGGWVEEHKKSDPLTNKSWEKHDFIDVMLSVIEDDPVSGHTRDTIIKANVMNLMLAGSDTTSTTMTWILAMLMKNPEALKRAQEEVEHHVGRDRRVEAQDIKNLVYLQAIVKETLRLYPPGPLLVPHEAMEDCHIQGYSVPKGTRVFANVWKLHRDPRLWSEAEKFSPERFMNENGEVDEGHNFEYLPFGSGRRACPGSTFATQVSLVTLARLLQAFDLAEPVDEPVDLKEGLGITLPKMTPLKILITPRLPRQFYH 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02435 519 Gene3D Cytochrome P450 25 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PANTHER CYTOCHROME P450 82C3-RELATED 13 518 - -
Cca01g02435 519 SUPERFAMILY Cytochrome P450 37 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 Pfam Cytochrome P450 38 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02435 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Cca01g02435 519 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02435 Cca-Chr1 53459677 53462703 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02435 38 518 Cytochrome P450 AT4G31940 47.967 2.44e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02435 - - gmx:100790675 895.19