Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02405 ATGGCTCTAGTGAAGGTTCCATTGCCAACCCACATGTCAATGAACTTGAGCATAGCATCTCACAAACGAACCAATTCAATCTGCATCTGCATGGCTAAGAGTAGTGAGGTGAAGCTCATTGGTAAATGGTCCAGTCCTTATACAATGAGGGTGAAGATTGCTCTCAACATCAAATCCCTTGAATATGAACACTTTGAAGAAACCATGAACCCCAAGAGTGAGCTTCTTCTTCACTCCAACCCTGTCTATGCCAGAGTCCCTGTTCTCATCCACCACGACAAACCCATATGTGAGTCTTTGGTCATAGTTGAATACATAGATGAAACATGGTCCACTGCTCCTTCCATCCTTCCCTCTCATCCTTATGATAGAGCTCTTGCTCGCTTTTGGGCTACTTACATAGACGATAAGTGGTTTCCTACCATTAGAAGCATTTTGTTTGTTGAAGAGGAGGAAGAAAGGAAGGCATACTTTGAGGTGTTGGAAGAAGTGCTTGAGAGGTTGGAGGATGCTTTTGAGAAATGCAGCAAAGGAAAACCCTTTTTTGGTGGAGACATGATTGGATTCCTTGATATTGCTTTTGGGTGCTTTCTGGGAGTGCTCAGTGCAGCAGAGCATAGGTGTGAGAGGAAACTACTTACTGAAGCAAAGGCTCCTGCTTTGGTGAAATGGGCTGAGAGATTTGCTGCTGACCCATCTGTTAAGGGTCTTATACCTGAGACTGATAAGCTTGTTGAGTTGTCCAAGTCTCTTCAGATCAAATGGAGAGCTTCTATTGGAAAGAAATAG 789 0.4373 MALVKVPLPTHMSMNLSIASHKRTNSICICMAKSSEVKLIGKWSSPYTMRVKIALNIKSLEYEHFEETMNPKSELLLHSNPVYARVPVLIHHDKPICESLVIVEYIDETWSTAPSILPSHPYDRALARFWATYIDDKWFPTIRSILFVEEEEERKAYFEVLEEVLERLEDAFEKCSKGKPFFGGDMIGFLDIAFGCFLGVLSAAEHRCERKLLTEAKAPALVKWAERFAADPSVKGLIPETDKLVELSKSLQIKWRASIGKK 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02405 262 Gene3D Glutaredoxin 31 116 - -
Cca01g02405 262 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 35 249 IPR045073 -
Cca01g02405 262 Gene3D - 117 258 - -
Cca01g02405 262 Pfam Glutathione S-transferase, C-terminal domain 129 232 IPR004046 -
Cca01g02405 262 CDD GST_N_Tau 37 110 - -
Cca01g02405 262 SFLD Main.3: Omega- and Tau-like 33 257 IPR045073 -
Cca01g02405 262 SUPERFAMILY GST C-terminal domain-like 108 250 IPR036282 -
Cca01g02405 262 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 120 257 IPR010987 -
Cca01g02405 262 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 35 114 IPR004045 -
Cca01g02405 262 PANTHER GLUTATHIONE S-TRANSFERASE U17 35 249 - -
Cca01g02405 262 Pfam Glutathione S-transferase, N-terminal domain 36 108 IPR004045 -
Cca01g02405 262 SUPERFAMILY Thioredoxin-like 37 139 IPR036249 -
Cca01g02405 262 SFLD Main (cytGST) 33 257 - -
Cca01g02405 262 CDD GST_C_Tau 121 249 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02405 Cca-Chr1 52959380 52961077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02405 34 251 Glutathione S-transferase Gene Family AT1G10360 58.447 1.95e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02405 K00799 - cam:101508281 343.969