Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02385 ATGACTTACAACAATCATTCCATCCTCTTCTTCCTCTTTCTATCCCTCCTACCCTTGTTCCAATCCCAGCTCACCGCCAACTACTACCAAAAAACCTGCCCTAAATTCTCCGAAATAGTCAACCGAACCGTGATTGGCAAACAACTCTCGGCGccgaccacagccgccgccacactccgcctcttatttcacgattgcatggtaggcggctgcgacgcctccatccttgtcacctccaactccttcaacaaggcggagcgcgacgccgagatcaacctccctctctcaggggacggctttgacgcggtctcccgtGCCAAGGCCATCCTGGAGATGGAGTGTCCCGGCGTCGCCTCTTGCGCGGACATCCTCGCAATAGCGGCGCGGCATCTCGTGGTGGCCGCTGGCGGCCCTGCCTTTGAAGTCCTCCTCGGCAGAAAAGACTCCCTGGAGTCCAAAGCCGAAAGCTCCGAGAAGCAGTTCCCCTTACCAACCATGCCAATGTCCCAAGTCATATCCATCTTCACCTCGAAAGGCTTCTCCGTTCAGGAAATGGTAGCCCTCGCTGGTGCACACACCATAGGGTTCTCCCACTGCAACCAATTCAGCAACAGAATATTCCACTTCAGCAAGAGTTCCGAAGTCGACCCCGCGTACAACCCTGGTTACGCGGAAGGGCTGAGGAAGCTGTGCGCGAATTACCAAAAGGACCCTTCGATGTCGGCGTTCAACGACGTGATGACGCCGATGAAGTTCGATAACATGTATTTCAAGAACTTGAGGAGAGGGTTAGGGTTGTTGGCCTCTGATAGCGCTATGTTTGCGGATCCGAGGACGAGGCCGTTCGTGGACACGTACGCCGATGACGAGGGTAAGTTCTTTCAGGACTTCGCACGTGCCATGGAGAAGCTTAGCGTTCTTGAGGTTAAGACGGGGACACAGGGAGAGGTGCGGTCAAGGTGTGATACCTTCAACAAGCTTAATATTTGA 990 0.4455 MTYNNHSILFFLFLSLLPLFQSQLTANYYQKTCPKFSEIVNRTVIGKQLSAPTTAAATLRLLFHDCMVGGCDASILVTSNSFNKAERDAEINLPLSGDGFDAVSRAKAILEMECPGVASCADILAIAARHLVVAAGGPAFEVLLGRKDSLESKAESSEKQFPLPTMPMSQVISIFTSKGFSVQEMVALAGAHTIGFSHCNQFSNRIFHFSKSSEVDPAYNPGYAEGLRKLCANYQKDPSMSAFNDVMTPMKFDNMYFKNLRRGLGLLASDSAMFADPRTRPFVDTYADDEGKFFQDFARAMEKLSVLEVKTGTQGEVRSRCDTFNKLNI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02385 329 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PANTHER PEROXIDASE 6 6 328 - -
Cca01g02385 329 SUPERFAMILY Heme-dependent peroxidases 23 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 CDD secretory_peroxidase 23 322 IPR033905 GO:0004601|GO:0042744
Cca01g02385 329 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601
Cca01g02385 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cca01g02385 329 ProSiteProfiles Plant heme peroxidase family profile. 23 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PANTHER - 6 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 Gene3D - 27 325 - -
Cca01g02385 329 Pfam Peroxidase 51 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca01g02385 329 Gene3D Peroxidase, domain 2 162 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02385 Cca-Chr1 52572711 52574110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02385 13 325 Peroxidase AT5G40150 56.550 6.04e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02385 K00430 - gmx:100781063 504.982