Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02384 ATGGAAACCGGTGGAGATGAACTTTACCATTCTTCGCTGGTGACCTTCTTTAAAAGGGTTTTTCTTTCTGGTGATGTTGTGCAGATGGAAGGGTTTTTCTCTTTGTTCCTCACTTTGGTGACCATCTTCCAATCCACCTTGAAGCAACTCTTTGAGGAATTTGAAAGTGGTGATGATTCTTCATTGCTAGGATCTGTAACAGTGCACATAATGGAAGCTTTGCAAACTAATTTAGATAGAAGATCGAAGCAGTATAAAGACCCTGCATTGACATATCTTTTTCTCATGAACAATGTTCATTATGTTGTCAGATTAGTTTGGAGATTCTTCATTGCTTATCTATTCAGGGCCTTAGCTCATCAGGTGTTGGGAGTGGTACTGGTGGCGGCAATGGTGGAACTGGAAGCAGTAGTGATTAAAACTCTTCTTAAAGGTAAAGCTTGCTTTGGAATAAAAGAAGCTGCAACTAGTTTGACAAAACATCTTGCACATAGAGCCCAGGAGACCTCTGAAGAATTTGAGGTGACAATTGAGAAAGATGCTACAAAGACTGCAGTTACAGATGGAACTGTCCATCCTTTGACACACTCTGTGATTAACTATCTATCAATCCACCTTGAAGCAACGTTTTCTGCAACTTGA 642 0.4019 METGGDELYHSSLVTFFKRVFLSGDVVQMEGFFSLFLTLVTIFQSTLKQLFEEFESGDDSSLLGSVTVHIMEALQTNLDRRSKQYKDPALTYLFLMNNVHYVVRLVWRFFIAYLFRALAHQVLGVVLVAAMVELEAVVIKTLLKGKACFGIKEAATSLTKHLAHRAQETSEEFEVTIEKDATKTAVTDGTVHPLTHSVINYLSIHLEATFSAT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02384 213 SUPERFAMILY Cullin repeat-like 18 112 IPR016159 -
Cca01g02384 213 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 108 IPR004140 GO:0000145|GO:0006887
Cca01g02384 213 PANTHER EXOCYST COMPLEX PROTEIN EXO70 131 204 IPR004140 GO:0000145|GO:0006887
Cca01g02384 213 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 108 - -
Cca01g02384 213 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 131 204 - -
Cca01g02384 213 Gene3D Exocyst complex component Exo70 120 211 - -
Cca01g02384 213 Gene3D Exocyst complex component Exo70 17 117 - -
Cca01g02384 213 Pfam Exo70 exocyst complex subunit 36 106 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca01g02384 213 Pfam Exo70 exocyst complex subunit 138 204 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca01g02384 213 SUPERFAMILY Cullin repeat-like 134 204 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02384 Cca-Chr1 52564275 52568651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02384 139 202 EXO70 exocyst subunit family AT5G03540 65.625 6.77e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02384 K07195 - ccaj:109788676 110.538