Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02334 ATGGCTGCTAGGAGTGAACACCACCAAACTGTTCCCCTTTCGGTGCTCCTGAAGCGTGAATTGGCGAATGAGAAAATTGAGAAACCTGAGATTTCTCATGGTCAAGTTTGCCAGAGCAAGAAAGCGGAGGATTTGACACTGCTCAAGATGGAATGTCAGAGGGTGGTCGAAGTTTTACAGCTATTTGATGGACACAATAGATCTGCTACTGCTATTTATGCCAAGGAGAATCTTCTAAATAATGTTTTAAGTGCAATTCCTTCAAATCTGAACAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGCTGGCTTTGTAAAAACTGATAAAGATTTTCAAGAGAAAGCACAAAAATTATTTTGTGGAACAAAAGTTAGCATTGTTAATTAA 396 0.4015 MAARSEHHQTVPLSVLLKRELANEKIEKPEISHGQVCQSKKAEDLTLLKMECQRVVEVLQLFDGHNRSATAIYAKENLLNNVLSAIPSNLNRDEWIAALPRALVAGFVKTDKDFQEKAQKLFCGTKVSIVN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02334 131 PANTHER ALPHABET, ISOFORM E-RELATED 3 129 - -
Cca01g02334 131 SUPERFAMILY PP2C-like 43 121 IPR036457 -
Cca01g02334 131 Gene3D - 21 130 IPR036457 -
Cca01g02334 131 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02334 Cca-Chr1 51947955 51950987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02334 1 130 PP2C-type Phosphatase Gene Family AT1G47380 69.343 4.15e-58 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02334 - - gmx:100816201 198.749