Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02301 ATGGGGAATCTTGTTTGGCTTGTGGCTGCGGAGAACGTGAGTGATGATGAGATGGGGTTGGAGGAGTTGGTGGGGAAGCTGAGGAGTGCAATATCAAAAGTTGACGGTGCATTTGTTAAAGAATTGAGAGGTGATAAGGGAAGGTCAATTATGGAAGAGAGTCTTGGAGGAATAGGTGAGATGGGATCAAAGACTGAAGTGGATTACTTTGGATTTAGTAGTTGGTGCAATTTGGGGTTCTATGAGGCTGATTTTGGGTGGGGAAAACCCACATGGGTGAGTGGTGTTGGTGCAGTTGGTTCAGTGTTTATGAATCTTATCATCCCTATGGATACAAGGTTGGGAGATGGCATAGAAGTTTGGGTTACCTTGGAGGAGGAGCACATGACTCTTTTGGAAGCAGACCCTGAATTCCTCACTTATGCAACCCTGGATCCAAGTCCTTTGGAAATCAGTTCCAAGTTCTAG 468 0.4551 MGNLVWLVAAENVSDDEMGLEELVGKLRSAISKVDGAFVKELRGDKGRSIMEESLGGIGEMGSKTEVDYFGFSSWCNLGFYEADFGWGKPTWVSGVGAVGSVFMNLIIPMDTRLGDGIEVWVTLEEEHMTLLEADPEFLTYATLDPSPLEISSKF 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02301 155 Gene3D - 1 140 IPR023213 -
Cca01g02301 155 PANTHER F21J9.9 1 151 - -
Cca01g02301 155 PANTHER VINORINE SYNTHASE-LIKE 1 151 - -
Cca01g02301 155 Pfam Transferase family 2 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02301 Cca-Chr1 51482555 51483022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02301 1 133 Monolignol Biosynthesis Gene Families AT5G48930 25.185 3.64e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02301 - - gmx:100305374 231.876