Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g02288 | ATGACGACGTCTCCCTATCCTCCCCGCCGCCGATCCGACTCCCACCACCGGACCACGCCCACCAGACCACCCCTCTCTCCCAGCTACGCCTCCTCCGAGTTCAGCACCTCCTCCGCCGAGACCCGCCGCAACCCCGTCACTACTGCCGCCAGGTCCTTCGCCGGGATATTCTCCGCCTGCTTCGCCCCGCCGGAGACCGACACCTCCAAGACCCTCGGGGATTCCGAGGAGTTCAAGTCTTCATCCACTGTATCGAATTCTTCAAGAACTAGTAGTCAGAGAGGGCGTGGCTCAAATCGAGGTACCAGCATCAGTTCACTCAACTTAGTCCCGGAGAAAGAGCCTGGCATTGTGAAGTTCACCATGGAGGAAATCTTCCAAGTCACAAGAAACTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGAGCTGTCTACAAGGCCAAACTCCTCGATGGGACTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTGTGTATGAGAAACATTTGGGAGTGGAGTTCCAGAGTGAGATCCAAACACTATCACGGGTGGAACATTTGAACTTGGTCAAGTTCTTTGGCTATTTGGAGCAAGGGGATGAAAGGATTGTTGTTGTGGAGTATGTTCCAAATGGAACCCTTAGAGAGCATTTGGATGGCATTCATGGAACCGTTCTGGACCTTGCTTCTCGTCTAGATATAGCAATTGATGTTTCTCATGCTATCACCTATCTTCATATGTATATAGATCATCCTatcattcatagagacataaaatcttcaaacattcttctgaccgaacatcttcgagctaaggtagcagactttggttttgctagacaagcccctgacagtgactctggcatgacacatgtttccactcaagtcaaaggaacagctggttacttggaccctgaatacctgaaaacttatcaactaactgaaaagagtgacgtgtattcatttggagttttgcttgttgaACTTGTCACAGGTAGACGCCCCATCGAACCAAAATTTGAACTCAAGGAGCGAATCACAGCAAAATGGGCTATGAAGAGGTTCATTGATGGAGATGCTATCTCGGTGTTGGACCCAAGACTAGATCAAACTGCTGCAAATTCTTTGGCACTGCAAAAGATTCTTGAGCTAGCCTTACAGTGTTTGGCTCCACGTAGACAAAGCAGACCTTCTATGAAGAGATGTGCCGAGATCCTTTGGGCCATCCGCAAGGATTTCAGAGAGCTAGCAGCTTCAAACCTTCGCTCATTTTCCACTACTTCCCAAAGGAGCACCTCAGTGAGAGAGTGA | 1314 | 0.4148 | MTTSPYPPRRRSDSHHRTTPTRPPLSPSYASSEFSTSSAETRRNPVTTAARSFAGIFSACFAPPETDTSKTLGDSEEFKSSSTVSNSSRTSSQRGRGSNRGTSISSLNLVPEKEPGIVKFTMEEIFQVTRNFSPSFKIGQGGFGAVYKAKLLDGTVVAVKRAKKSVYEKHLGVEFQSEIQTLSRVEHLNLVKFFGYLEQGDERIVVVEYVPNGTLREHLDGIHGTVLDLASRLDIAIDVSHAITYLHMYIDHPIIHRDIKSSNILLTEHLRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELKERITAKWAMKRFIDGDAISVLDPRLDQTAANSLALQKILELALQCLAPRRQSRPSMKRCAEILWAIRKDFRELAASNLRSFSTTSQRSTSVRE | 437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g02288 | 437 | Coils | Coil | 436 | 437 | - | - | |
Cca01g02288 | 437 | Gene3D | Transferase(Phosphotransferase) domain 1 | 210 | 431 | - | - | |
Cca01g02288 | 437 | MobiDBLite | consensus disorder prediction | 19 | 46 | - | - | |
Cca01g02288 | 437 | Gene3D | Phosphorylase Kinase; domain 1 | 93 | 209 | - | - | |
Cca01g02288 | 437 | PANTHER | CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 | 9 | 426 | - | - | |
Cca01g02288 | 437 | ProSitePatterns | Protein kinases ATP-binding region signature. | 138 | 164 | IPR017441 | GO:0005524 | |
Cca01g02288 | 437 | Pfam | Protein kinase domain | 137 | 405 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g02288 | 437 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 254 | 266 | IPR008271 | GO:0004672|GO:0006468 | |
Cca01g02288 | 437 | ProSiteProfiles | Protein kinase domain profile. | 132 | 409 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g02288 | 437 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Cca01g02288 | 437 | SMART | serkin_6 | 132 | 409 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca01g02288 | 437 | MobiDBLite | consensus disorder prediction | 66 | 108 | - | - | |
Cca01g02288 | 437 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 9 | 426 | - | - | |
Cca01g02288 | 437 | SUPERFAMILY | Protein kinase-like (PK-like) | 107 | 410 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g02288 | Cca-Chr1 | 51263249 | 51267425 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g02288 | 120 | 400 | Receptor kinase-like Gene Family | AT1G79620 | 46.316 | 3.37e-71 | 240 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IV | Cca01g02288 | Pkinase | 1.2e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g02288 | - | - | gmx:100792034 | 688.723 |