Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g02284 | ATGCATAAAGTCTGGTGGCCTCTGATCCTTTCGCGATTCCAAATATTAGACGAGAATGAGCTTATCACTGGATGGTTTGATTATTTAACAGAAAAAGAGAGCTGGAAAATGGGAGGTTGTTGTTGTTCTGCTAGGAAACCTCACCTGCATGGAACACCAGTGTATTACTATTGCCCACCAACTTTAGAAGAGCATGAGTCTTTGACATCTAATGACGGTGTGGCTGCTTCACTCACTACTGGATTGCTGGTAGGCTTGAACTTAGAAACTTCCACACCTGATACATATCAGCCGCCTCCTGCACCTCTGCCTTATGATGTGGTCTTGGGAGGTCCAGCATCAACAGATTCTGAATCAGGCAGAGAAACAGTTAGTGGCAGTAGCTTTGGAACATTAATTACATGTGAAGATCTTGAAGAAGCTCACTGTAAAGCTAAAGCTATTTCAGCACCTATATCTCCAAGCAAGGCAGAACTGTCAAAATCAACTGAATTTCATGCATTAGTGACGGAAGAAGAGGACGGCTGTCCAATTTGTCTTGAAGAATATGATGTTGAGAATCCTAAAACTCTGACAAAATGTGAACACCACTTTCACCTGTCTTGCATTCTCGAGTGGATGGAAAGAAGTGATTCTTGTCCTATATGCGATCAGGAGATGATATTTGACCAGACACTGGACTAG | 684 | 0.4254 | MHKVWWPLILSRFQILDENELITGWFDYLTEKESWKMGGCCCSARKPHLHGTPVYYYCPPTLEEHESLTSNDGVAASLTTGLLVGLNLETSTPDTYQPPPAPLPYDVVLGGPASTDSESGRETVSGSSFGTLITCEDLEEAHCKAKAISAPISPSKAELSKSTEFHALVTEEEDGCPICLEEYDVENPKTLTKCEHHFHLSCILEWMERSDSCPICDQEMIFDQTLD | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g02284 | 227 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RHB1A-RELATED | 37 | 227 | - | - | |
Cca01g02284 | 227 | SMART | ring_2 | 176 | 216 | IPR001841 | - | |
Cca01g02284 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 176 | 217 | IPR001841 | - | |
Cca01g02284 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 154 | 223 | IPR013083 | - | |
Cca01g02284 | 227 | Pfam | Ring finger domain | 176 | 216 | IPR001841 | - | |
Cca01g02284 | 227 | SUPERFAMILY | RING/U-box | 167 | 223 | - | - | |
Cca01g02284 | 227 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 37 | 227 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g02284 | Cca-Chr1 | 51232481 | 51236738 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g02284 | 37 | 227 | C3H Transcription Factor Family | AT4G00335 | 60.733 | 9.26e-79 | 233 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g02284 | - | - | gmx:100804435 | 421.779 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Cca07g01931 | 07 | 46588524 | 46593467 | Cca01g02284 | 01 | 51232481 | 51236738 | PCT |