Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02279 ATGGAAACTTGCACGGCTCTGTTGCTTTTAACGGCGATCACAGCATACTTGATATGGTTCACGTTCATCTCACGGTCGCTCAAGGGTCCACGTGTCTGGGCCTTATTGGGAAGTCTGCCGGGCCTCATAGACAACTGTGACCGCATGCATGACTGGATCTGTGACAACCTACGCGCGTGTGGTGGCACGTACCAAACTTGCATCTGTGCAATCCCCTTCCTCGCCAGGAAGCAGGGTCTCGTGACAGTCACGTGCGACCCGAGGAACTTGGAGCACATACTCAAGACCCGCTTCGACAATTACCCCAAAGGCCCCACGTGGCATGCTGTCTTTCATGATCTGTTGGGTGATGGGATCTTCAATTCTGATGGTGACACGTGGCTCTTCCAGCGTAAGACTGCTGCCTTGGAATTTACCACCCGGACGTTGCGCCAAGCAATGGGTCGGTGGGTGAGCCGAGCCATCAACCGGCTCTGCTTGATCCTCAAAAGGGCCGACGATCAAGCTGAGTCGGTTGATCTTCAAGACTTGATGCTTCGGCTCACTTTTGATAATATTTGTGGGTTGGCTTTCGGGCAGGACCCACAGACATGTGTGTTGGATCTGCCCGATAACTGCTTTGCCACGGCTTTCGACCGAGCCACTGAAGCCTCGCTCCAGCGGTTCATTTTGCCTGAGGTGTTGTGGAAGATGAAGAAATGGCTTCGGCTGGGAATGGAAGTCAGCTTGAGCCGAAGCCTAGTCCACGTGGATGAACATTTGTCAAATGTAATTGAGAAACGCAAGGTGGAGTTGCTGAGTCAGCAAAAAGATGGGACTCTTCATGATGACTTGTTGACCAGGTTTATGAAGAAAAAGGAATCCTACACAGACAAGTTTCTCCAACACGTGGCGTTGAATTTTATCCTAGCTGGACGTGACACGTCATCGGTTGCAATGAGCTGGTTCTTTTGGTTGGTGATTCAGAATCCAAAGGTGGAAGAGAAAATTCTACGTGAAATTTGCATGGTTTTGATAGAGACACGTGGCGATGATGTGGCTAAGTGGTTGGATGAGCCCTTGGCCTTCGAGGAAGTTGACCGTTTGGTTTATCTCAAGGCTGCATTGTCGGAGACACTAAGGTTGTACCCTTCGGTGCCGGAGGACTCAAAGCATGTGGTGGCCGACGACGTGCTGCCGGACGGCACGTTCGTGCCGGCGGGATCGTCGGTGACATATTCGATATATTCGGCAGGGAGGTTGAAGTCGACGTGGGGTGAGGATTGCATGGAGTTTAGACCTGAGAGGTGGTTGTCATCGGATGGGAAAAAGTTCATCACGCATGACTCTTTCAAGTTTGTTGCATTCAATGCTGGTCCAAGGATATGTTTGGGGAAGGATTTGGCTTACCTGCAGATGAAGTCCATTGCTGCGGCGGTGCTGCTCCGGCACCGCCTTGTGCTGGTGCCCGGCCACCAGGTGGAGCAAAAGATGTCACTCACGCTGTTCATGAAAAATGGTCTCAAGGTCAATGTGCATGAGAGGGATTTAAGAGGAGTTATCGCTAGTATACAAAAATAA 1560 0.5109 METCTALLLLTAITAYLIWFTFISRSLKGPRVWALLGSLPGLIDNCDRMHDWICDNLRACGGTYQTCICAIPFLARKQGLVTVTCDPRNLEHILKTRFDNYPKGPTWHAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVSRAINRLCLILKRADDQAESVDLQDLMLRLTFDNICGLAFGQDPQTCVLDLPDNCFATAFDRATEASLQRFILPEVLWKMKKWLRLGMEVSLSRSLVHVDEHLSNVIEKRKVELLSQQKDGTLHDDLLTRFMKKKESYTDKFLQHVALNFILAGRDTSSVAMSWFFWLVIQNPKVEEKILREICMVLIETRGDDVAKWLDEPLAFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVADDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCMEFRPERWLSSDGKKFITHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLVLVPGHQVEQKMSLTLFMKNGLKVNVHERDLRGVIASIQK 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02279 519 Pfam Cytochrome P450 80 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PANTHER CYTOCHROME P450 4 510 - -
Cca01g02279 519 PANTHER CYTOCHROME P450 86A7 4 510 - -
Cca01g02279 519 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 SUPERFAMILY Cytochrome P450 21 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02279 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Cca01g02279 519 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02279 Cca-Chr1 51149179 51152502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02279 1 519 Cytochrome P450 AT2G45970 78.119 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02279 K15398 - gmx:100779986 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02279 01 51149179 51152502 Cca01g02279 01 51149179 51152502 ECH