Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02168 ATGAGCACGCAGCAGCTAAAGAGGTTCAACTCAATGGAACGCAGACCCAGAATGCTGAAGGACTTCCTCAGCGAGAATCTAAACTCTTGCTCCTCAACTGGCTTCAAATCACTCCCTAGAAAACCAAACACCACCATGCACACGCTCATGCAAATGGAACTCAAatcaccatcaccatcaccatttcaaacactcatcaacaccaTAAGAAGCATCTCTCTCTTCACCTCGATGAGAAAATCATCGCCCTCCGTCCTCTCCCTCCCCAGAACCCTCTCGCGCAAGCTGTCATCATCTTCCAGAAGAAGAACCCGAGCGTGCAACCAAGTCAACATAGGATCAACGGTCAAGATCAAGGACATCATACGCTGGACATCGTTCAGGGACGCTGTGGAGCCTTCTCTTCCGCCGTTGGATTTCGcctcctctaccactaccacaatcaccaccaccgcaaccaccacTTGCTGCAGCAGCGCCTCTAGCTGGAGCGAGAGCGATTACTTCGCCACTTCGTGGGAAGAACCGCAAAACGACGGCGTTGAAAGTAAAACCTTCTCGTTTTCACCTCTTGTTGTCGGCAAAGACTCCGGGGCCAAGAAAGTTTTAACTTGCCAAGAAGAACAACACAGTCCAGTTTCAGTTCTTCAGGTTGGAGAAGATGAATTCTCACTTTTTGATCAAAGCCTTGCCAATATTGAAAGGAGAAAACAGAAGTTTATTCAGACAGTTGAAAAATTGGAGAGCCTTGCAAAATTTGACCTTGCAAATTTTGACCAATGTCTCTCATTAGATGACAACTCTGGCTATGATGAAGAATATGAAGATGAAGACAGTGACATTGAAGGACAAGATTGGATTGAGGAAAAGGCAAAGCAGCTGCTACATTTTGTGAAATCCAGAGGTTCAGCACATGGCTGTAGGGACTATTTGGATACCATTCTGTTGGACTTTTTCAGGGAAGAGCTAAGTGGAAGTAGAAACCAAAATAAGAATGATGAGGAGTTTGAGTTGGAGTCATTGAGAATAGCTGAGGATTGGATAAATGGGTCATTTGCTTTTGATGCAGGGAATGCTAATAAACATGCTTTTATTAAGGACATGGATAGAAGAGAACAGTGGAGTAGATTTAAGGAGGAGCAGGAAGAATTGGCTTTTGAAATTGAGACAGCTATATTGCATAGTTTGGTTACTGAGCTAGTGGACCTGGATGGTTAA 1218 0.413 MSTQQLKRFNSMERRPRMLKDFLSENLNSCSSTGFKSLPRKPNTTMHTLMQMELKSPSPSPFQTLINTIRSISLFTSMRKSSPSVLSLPRTLSRKLSSSSRRRTRACNQVNIGSTVKIKDIIRWTSFRDAVEPSLPPLDFASSTTTTITTTATTTCCSSASSWSESDYFATSWEEPQNDGVESKTFSFSPLVVGKDSGAKKVLTCQEEQHSPVSVLQVGEDEFSLFDQSLANIERRKQKFIQTVEKLESLAKFDLANFDQCLSLDDNSGYDEEYEDEDSDIEGQDWIEEKAKQLLHFVKSRGSAHGCRDYLDTILLDFFREELSGSRNQNKNDEEFELESLRIAEDWINGSFAFDAGNANKHAFIKDMDRREQWSRFKEEQEELAFEIETAILHSLVTELVDLDG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02168 405 PANTHER OS04G0572500 PROTEIN 1 404 - -
Cca01g02168 405 PANTHER DUF4378 DOMAIN PROTEIN 1 404 - -
Cca01g02168 405 Coils Coil 230 250 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02168 12 401 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 32.102 1.50e-43 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02168 - - gmx:100802653 525.398