Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02142 ATGACAGAACCACCTCCCTCCGCCATAGACCCCTACGAGTTCATGAAAATCAAGTTGAACCCCGACGGCTGCTCCCTCACGCGCAACTACGATGTCCCCATGctccccctcatcctcTACTTCCACGGCGGCGGCTTCATCCTCTACCACCCCGCCTCCCTCATCTTCCACGATTCCTGCACCGCCCTGGCCGCCGCCCTCCCCGCCGTGGTGGCCTCCGTGGACTACCGCCTCTGCCCCGAGCACCGCCTCCCGGCCGCCTACGAGGACGCGCAAGACGCCCTCGTGTGGGCCCAGGCCCAGGCCCAGAATTCAGGCGAGTCCGACCCGTGGGTCCGCGAGCACGTGGATTTCTCCAAGTGCTTCCTGATGGGAAGCAGCGCGGGGGGAAACATCGTCTACTTCGCGGGGCTACGTGCGGTCGAAATGGACCTCTCGCCATTGAAAATCCTGGGCATCGTAATGAACATCCCTTACCTCAGTGGGGTCCAGAGATCCGAATCCGAACTCAGACTCGTCGACGATCACATACTGCCGTTAGTAGCCAACGACATGATGTGGTCGCTCTCGCTTCCCGAGGGCGCCGATCGCGACCACGTCTACTGCAATCCGACGGCGGCCGAGCAGGAGCACAAGGAGCGGATCGCACGGTTGCCCTGGTGCCTGATCAACGGCTACATGGGGGATCCCTTGGTGGAGAAGCAGATGGAGCTTGGTAGGATCTTGGAGAGGCATGGGGTCCACGTCGAGACGCATTTTGCCCACGATGGCTTTCATGCGGTCGAGCTCTTTCACCCTTCTAAGGCCAAAGCTTTGGAAGATTTCGTCAAGAAATTTGTCCACGATGCTTCTCTCCATGCCTCCATCTGA 870 0.5931 MTEPPPSAIDPYEFMKIKLNPDGCSLTRNYDVPMLPLILYFHGGGFILYHPASLIFHDSCTALAAALPAVVASVDYRLCPEHRLPAAYEDAQDALVWAQAQAQNSGESDPWVREHVDFSKCFLMGSSAGGNIVYFAGLRAVEMDLSPLKILGIVMNIPYLSGVQRSESELRLVDDHILPLVANDMMWSLSLPEGADRDHVYCNPTAAEQEHKERIARLPWCLINGYMGDPLVEKQMELGRILERHGVHVETHFAHDGFHAVELFHPSKAKALEDFVKKFVHDASLHASI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02142 289 Gene3D alpha/beta hydrolase 3 286 IPR029058 -
Cca01g02142 289 PANTHER ARYLACETAMIDE DEACETYLASE 33 281 - -
Cca01g02142 289 SUPERFAMILY alpha/beta-Hydrolases 35 284 IPR029058 -
Cca01g02142 289 Pfam alpha/beta hydrolase fold 38 261 IPR013094 GO:0016787
Cca01g02142 289 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN 33 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02142 Cca-Chr1 49132288 49134433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02142 35 250 Carbohydrate Esterase AT5G16080 37.727 6.10e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02142 - - aprc:113850489 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g02142 01 49132288 49134433 Cca01g02142 01 49132288 49134433 ECH