Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02138 ATGCCTAAAGCATTCTCCACCCAACACGGTTGGTATCTCTCTACACTTTCCTCTGCATTAGAAAATGCCCAAGTTCTTACCTCCAATGACAATAATAATCTCGAAATCGCTTCTTCTAAGTTGATTTATACCTACACATACGCCATGAGCGGTTTTAGTGCAAATTTGTCACCCAAAGAGCTTGAAGCTCTCAAAAGCTCCACAGGTTACATTTCTTCCATACCAGATCTTCCAGCTAAGCTTGACACAACTCATTCACCACAATTTCTCGACCTTAATCCCAACACGGGGGCATGGCCTATTGGGAAATTTGGCGAAGATATCATTGTTGGGTTGGTGGATACGGGAATTTGGCCAGAAAGTGAAAGCTTCAAAGATGAGGGGATGACTAAAATCCCTTCACGATGGAAAGGGCAATGTGAAGATAGCATCAAATGCAACAACAAACTCATTGGAGCTCGTTTCTTTCACAAAGGAGTGCTTACTAAATACCCCTATCTTGCCAGAAATGAGAACTCAACTCGGGACACACAAGGACATGGGACCCACACATCAAGCACCGTGGCTGGGAGCCAAGTTGACAACGCATCGTTCTTTGGCTATGCCAATGGATCAGCGAGAGGAATAGCTCCACGTGCGAGAGTAGCCATGTACAAGGCCTTGTGGGAAGATAGAACCATGTCATCTGATATAATAGCCGCTATTGATAGTGCAATATCAGATGGGGTGGATGTTCTTTCCTTGTCACTTGGACTTGATGATGTGCCCTTTTTCACTTGGAAGGGTCTTTACCTGAAGCAAACAAAAGGCACAACAAGTGGAACGAAAGCGATGAACGATGACGACGAGCGCAACGAAGGAGACCTTTCCCGAGAGTTTCGCCGCACTCCCAACTTCGACGAAGACGGAGACATTGCCACGCTCCTGGAAAAGCGCGTCGAATCCACGTCTCCGCCGCTGTACTACGGCGACCGCTGCTTCACTTTCTCTCATCTCTCCAACGCCGTTCGTTCCCTCGGTTCCCGCCTCCGCTCTATCCTGCTTGGTGCGGATGACGCGCACTTGATCATAGCAAAATCCCAAGGTAATGATGATGTTAAGCATGAAGAGGGAACTTTACAGACACCTGAGTCCTTGGAAACTATCATGCCTAGTGAAGAGGCGGTGGCCGAATCAAGTGAAGAGTATAGACCAAAGATAGTGGGGATTTATATGCCTCCTTCTGTTGAATATATTGTTGCTGTTCTTTCAGTACTGAGGTGTGGGGAAGCCTTCTTGCCTCTGGATCCTTTTTGGCCAAATGAAAGGATATTGTCTGTTGCTTCTTCTTCAAATGTTGATCTCATGATAGGGTCCCAATCTTCTTTTGGTAAAAATAACTCAGACAAGCTTGATGAATCACATTGGCTGGTAAAGTCAATTGGTTGTCCTGTTTTGAATTACTCCATCGATGAAAACCTTCAGGTATGTAGTGGTTCAACAGATTTAGCATGGCCTTGTGCCAATGAAAAACAAAGATCATTCTGCTATCTGATGTACACATCTGGATCAACTGGAAAGCCTAAAGGAGTGTGTGGCACTGAACAAGGTCTTTCGAATCGCTTTTTATGGATGCAAGGAATGTATCCTCTGAATGGGCAGGAACTATTGTTGTTTAAGTCATCAGTTAGCTTCATTGACCACCTGCAAGAATTTCTCAGTGCTATTTTGACTGCTTGTGTGTTAGTTATTCCTCCTTTTGACGAACTAAAAGAAAATATATATTCTATAATAGATTTTCTGCAGGCATATTTTGTTAATAGGCTTACAGCTGTTCCATCACTAATGAGGACTATTCTTCTTGGATTGCAAACCCATGATAACATGTGGATGCGGGTTGAAAAATCATTGAAATTGCTTGTGCTCAGTGGTGAAACTTTTCCTTTGATCTTGTGGGAGATGCTTTCAACTATATTACCAAAGACATCAATCTTGAATTTATATGGAAGTACCGAGGTCTCCGGTGACTGTACATATTTTGATTGCGAGAGGATACCATTGATCGTGAAGGATGAAATGCTAACTAGTGTCCCAATAGGTTTACCCATTACTAACTGTGATGTGATACTTCTTGGTGAAAATGGTGCAGCAAATGAGGGAGAGCTATATGTTGGTGGTTCTTGCATCTCAAGGGGTTATTATAATGAAACTAATAAAATGTCTGATGCATTTGCAAAGTTGCCTCAAAGTTACAGTTGTGGCAATTCTGTTAATGCTTGCAGAGGCCAATTATACTTTAGAACTGGTGATTTAGTCAAACAGTTGCCAAGTGGTGACTTTGTATTTTTAGGAAGAAAAGACCGCATTATAAAAGTCAATGGACAGCGTATTGCCCTGGAAGAAATTGAAGATTTGCTAAGGGAACATCCATATATAAATGATGCTGCCGTAGTTTGTCGAAATAATCAGGCAGACCTTATGCTTCTTGAAGCCTTTATCATATTAAAGAAAAAGGAAAGATTGGGTGAATTATTAATACCTTCAATCAGAAGTTGGATGATTAACAAACTACCATCAGTTATGCTTCCCAACCGTTTCATCTTTATGGAATCATTTCCTGTGTCTCCAAGTGGTAAGGTTAATTATGAGTTGTTGGTTGGCTCAGCATTATTGACAATGAATGTGAAGGAAAAGGTTGGTAACATTGACTGCAGCAATCTTCTGAAACTTATTAAAAAGGTCTTTCACGATGCTTTAGTGGTTCAAAAGGTTTCCAATGATGATGATTTCTTTACGATGGGAGGTAACTCTCTTTCTGCTGCACATGTTGCTTACAGTTTGGGGATTGACTTGAGATTTCTTTACTACTATCCAAGTCCTTTTAAGCTTTGCATGGCTCTTCTCCAGAAAAGAGGATCATGCTCTTTGCATAACAGGTTGGATATTTGTTTTCAAATGAAAACAAACAGACAAGATGATATTTGTATCAATCATGCTGAAAATACTAGTCCTCTTGAATCAAAGATGATTTTGAAAGATAATGAAGACAATTCTTTTCCTTCTAAACGCTTAAAGAAGGGTTCTGAAGATGTTGTATCATGGGATGATGTATCATTCCCATGGCATTCCCCTTCACTATTATCATTCTCAGTTAGCCGATGCAACAAGGTGTTGCATAAAGGGCAGCCGGCAGTAACTGATATGCACCAAACAACTTGGTCTGCAAATGTTCCAAGAGGTAGTAGAGGTCACATGAAAGACTTTTGGAAAGTTTACATGGAATCTTGTGTTGATGCCTCACCATTGCTTGTGTTTAAAGGCACAGACATTTATTTGTTCATTGGATCTCACTCTCATAAATTTCTCTGCTTTAATGCTAGAAGTGGTTCTGTCCAGTGGGAGATCAAACTAGAAGGCCGCATTGAATGTACAGCAGCAATTGTTTGTGATTTTTCCCAGGTTGTTGTTGGATGTTACATGGGAAAAATATATTTCCTTGATTTTTTGAATGGACAGATCTGTTGGATTTTCCAAACTTCCGGTGAGGTAAAATCACAGCCAGTTGTAGACACATGCAGACAATTGATCTGGTGTGGCTCTCATGATCACAACTTATATGCTCTTGACTACAAAAAACACTGTTGTGTGTACAAGCTACCATGTGGAGGCAGTATATATGGGTCACCTGCAATTGATGAGGCTCATGGCTTGCTTTATGTGGCTTCTACCAGTGGTCGTATAACAGCTATATCGATATCGGCTTCTCCATTTAATATATTGTGGCTACATGAATTAGAAGTCCCTGTGTTTGCTTCTCTAGCTGTCACCCACAATGGAACTGTAATATGTTGCTTGGTGGATGGCCATGTTCTTGCATTGGATCCAAATGGATCCATTGTTTGGAAGAAAACTACTGATGGTCCAATATTTGCCGGGCCATGCATACCTTCTGTTCTTCCTCATGAGGTGCTTGTATGCTCCAGGAGCGGAAGTGTGTACTCGTTCAAACTGGATGAGGGGGACCTACAATGGGAATACAATGTTGGAGATCCAATTACTGCATCTGCTTATGTTGACGAGCACTTGCAGCTGGAATCTGACGCCTCTCCCACTTCAGACAGGTTAATTTGCATTTGTTCCAGTTCTGGAGGCATAAACCTTCTTCGAGTGAACGCGAATCTCTCCAAAGATGCAAATCAACAAAGACGGGATGTGCAAGAATTTGCAAGGCTAAACTTGGCAGGGGATATATTCTCTTCACCTTTAATGATTGGTGGTAGGATTTTTGTTGGTTGTCGGGACGACTACTTGCATTGTATTGCCCTTGAAATTCCAAAGCAACATGAAAGTTAA 4332 0.4155 MPKAFSTQHGWYLSTLSSALENAQVLTSNDNNNLEIASSKLIYTYTYAMSGFSANLSPKELEALKSSTGYISSIPDLPAKLDTTHSPQFLDLNPNTGAWPIGKFGEDIIVGLVDTGIWPESESFKDEGMTKIPSRWKGQCEDSIKCNNKLIGARFFHKGVLTKYPYLARNENSTRDTQGHGTHTSSTVAGSQVDNASFFGYANGSARGIAPRARVAMYKALWEDRTMSSDIIAAIDSAISDGVDVLSLSLGLDDVPFFTWKGLYLKQTKGTTSGTKAMNDDDERNEGDLSREFRRTPNFDEDGDIATLLEKRVESTSPPLYYGDRCFTFSHLSNAVRSLGSRLRSILLGADDAHLIIAKSQGNDDVKHEEGTLQTPESLETIMPSEEAVAESSEEYRPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFWPNERILSVASSSNVDLMIGSQSSFGKNNSDKLDESHWLVKSIGCPVLNYSIDENLQVCSGSTDLAWPCANEKQRSFCYLMYTSGSTGKPKGVCGTEQGLSNRFLWMQGMYPLNGQELLLFKSSVSFIDHLQEFLSAILTACVLVIPPFDELKENIYSIIDFLQAYFVNRLTAVPSLMRTILLGLQTHDNMWMRVEKSLKLLVLSGETFPLILWEMLSTILPKTSILNLYGSTEVSGDCTYFDCERIPLIVKDEMLTSVPIGLPITNCDVILLGENGAANEGELYVGGSCISRGYYNETNKMSDAFAKLPQSYSCGNSVNACRGQLYFRTGDLVKQLPSGDFVFLGRKDRIIKVNGQRIALEEIEDLLREHPYINDAAVVCRNNQADLMLLEAFIILKKKERLGELLIPSIRSWMINKLPSVMLPNRFIFMESFPVSPSGKVNYELLVGSALLTMNVKEKVGNIDCSNLLKLIKKVFHDALVVQKVSNDDDFFTMGGNSLSAAHVAYSLGIDLRFLYYYPSPFKLCMALLQKRGSCSLHNRLDICFQMKTNRQDDICINHAENTSPLESKMILKDNEDNSFPSKRLKKGSEDVVSWDDVSFPWHSPSLLSFSVSRCNKVLHKGQPAVTDMHQTTWSANVPRGSRGHMKDFWKVYMESCVDASPLLVFKGTDIYLFIGSHSHKFLCFNARSGSVQWEIKLEGRIECTAAIVCDFSQVVVGCYMGKIYFLDFLNGQICWIFQTSGEVKSQPVVDTCRQLIWCGSHDHNLYALDYKKHCCVYKLPCGGSIYGSPAIDEAHGLLYVASTSGRITAISISASPFNILWLHELEVPVFASLAVTHNGTVICCLVDGHVLALDPNGSIVWKKTTDGPIFAGPCIPSVLPHEVLVCSRSGSVYSFKLDEGDLQWEYNVGDPITASAYVDEHLQLESDASPTSDRLICICSSSGGINLLRVNANLSKDANQQRRDVQEFARLNLAGDIFSSPLMIGGRIFVGCRDDYLHCIALEIPKQHES 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02138 1443 Gene3D - 1247 1437 IPR015943 GO:0005515
Cca01g02138 1443 Gene3D - 1055 1246 IPR015943 GO:0005515
Cca01g02138 1443 MobiDBLite consensus disorder prediction 276 296 - -
Cca01g02138 1443 Gene3D - 898 960 IPR036736 -
Cca01g02138 1443 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 1066 1438 IPR011047 -
Cca01g02138 1443 PANTHER EBONY 294 1436 - -
Cca01g02138 1443 Pfam Subtilase family 105 279 IPR000209 GO:0006508|GO:0008236
Cca01g02138 1443 Gene3D Peptidase S8/S53 domain 107 255 IPR036852 GO:0004252|GO:0006508
Cca01g02138 1443 Gene3D - 366 779 IPR042099 -
Cca01g02138 1443 SUPERFAMILY Subtilisin-like 29 257 IPR036852 GO:0004252|GO:0006508
Cca01g02138 1443 Pfam Peptidase inhibitor I9 5 81 IPR010259 -
Cca01g02138 1443 CDD A_NRPS 397 878 - -
Cca01g02138 1443 Pfam PQQ-like domain 1164 1202 IPR002372 -
Cca01g02138 1443 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Cca01g02138 1443 Pfam AMP-binding enzyme 400 785 IPR000873 -
Cca01g02138 1443 Pfam AMP-binding enzyme C-terminal domain 794 872 IPR025110 -
Cca01g02138 1443 SMART ire1_9 1266 1297 IPR018391 -
Cca01g02138 1443 SMART ire1_9 1094 1129 IPR018391 -
Cca01g02138 1443 SMART ire1_9 1310 1340 IPR018391 -
Cca01g02138 1443 SMART ire1_9 1138 1171 IPR018391 -
Cca01g02138 1443 Gene3D - 780 885 IPR045851 -
Cca01g02138 1443 ProSitePatterns Putative AMP-binding domain signature. 511 522 IPR020845 -
Cca01g02138 1443 MobiDBLite consensus disorder prediction 271 296 - -
Cca01g02138 1443 Pfam PQQ-like domain 1229 1425 IPR002372 -
Cca01g02138 1443 SUPERFAMILY ACP-like 899 957 IPR036736 -
Cca01g02138 1443 SUPERFAMILY Acetyl-CoA synthetase-like 317 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02138 Cca-Chr1 49029876 49056801 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02138 2 252 Subtilisin-like Serine Gene Family AT5G67090 48.249 5.57e-69 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02138 K00142 - gmx:100820175 2000.33