Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02137 ATGGAATACCTTACATCTCTCTTGATCTTTTTTGGGCTGGCAAGCATTCATGTCCTAGTCTCCATCTTCAAAACACTAAAATCCTCCAAATACCCACCAGGGCCTCGCCCTTTTCCAATCATAGGAAACAGCTTGGAGCTTGGAAATCAACCTCACCAAGCACTTGCCAAGCTTTCTCAAATTCATGGTCCTATTATCACTCTTAAGCTTGGTAGCATCACCACCATAGTTATTTCCTCTCCACAACTTGCCAAAGAAGTATTACATAAAAATGATCACATCTTCTCTAGCCGAACCTTAACAGATGCTAGTCGAGCACTTGACCACCACATACTTTCAGTTTCATGGTTGCCACCTTTGGCTCAGTGGAGGACCCTCAGAAGAATTTGTGCAACAGAAGTTTTCTCTTCCCAAAAGCTTGATTCTACACGAGCTCTTCGTCAAAGGAAGGTGCAAGAATTGTTAGATTATATCAAGGAAAGAAGCAAGAAATGTGAAGCTTTGGATATTGGTGAGGTTGTCTTAGTAACCCTTCTTAATTCCATATCAAACACTTTGTTCTCAATGGATTTGGCTCACTACTCTTCTGATAAGTCTCATGAGTTCAAGGGCATCATTTGGGGTATCATGGAAGAATCTGGAAGGCCTAATGTTGTGGACTTTTTCCCAATTCTTCGCCTTCTTGATCCACAAGGTGCGCGGAGAAGAATGAATGGTTATTTTGAAAAGTTAATTTCATTTTTTGATGGACTCGTAGAAGAAAGATTGCGTTTAAGGGCATCAAAAAATGAATCCATGGCATGCAATAATGATGTGTTAGATTCTGTGCTGGAACTCATGCTTGAAGACAATTCACAAGTCACCCGCCCTCATGCGTTGCATTTATTTGCGGATTTATTTGTGGCGGGAGCAGACACAACATCAAGCACAGTTGAATGGGCAATGACAGAGTTGTTACGTAATCCGGAGAAACTAGAAAAGGTTAAACAAGAGTTTGAACATATCCTCACCAATGGTGAACATATTGAAGAATCACACATCTCAAAGCTTCCTTACCTGCAAGCAGTTGTGAAAGAAACCTTCCGCATGCACCCACCAGCCCCATTATTATTGCCACGTAAGTCAGATATTGATGCTGAAATAGGTGGCTTCATGGTGCCTAAAAGTGCACAAATTATGGTTAATGTATGGGCCATGGGAAGAGATTCAAGTATTTGGACAAATCCAAATCAATTTTTACCTGAAAGGTTCTTGGACACTGACACTAACTTTAAAGGTCAGCATTTAGAGTTAATACCCTTTGGAGCTGGAAGAAGAATTTGTCCTGGATTGCCATTTGCTTTTAGGACTGTGCATGTTACGTTGGCCTCTCTTTTATACAACTATGATTGGAAGCTTGCTGATGGGATAAAGCCCCAGGACATAGACATGTCTGAGATATTTGGGCTTACCTTACATAAGGCACAACCTCTGCGAGTTGTTCCCATCCTAAAATAA 1497 0.4108 MEYLTSLLIFFGLASIHVLVSIFKTLKSSKYPPGPRPFPIIGNSLELGNQPHQALAKLSQIHGPIITLKLGSITTIVISSPQLAKEVLHKNDHIFSSRTLTDASRALDHHILSVSWLPPLAQWRTLRRICATEVFSSQKLDSTRALRQRKVQELLDYIKERSKKCEALDIGEVVLVTLLNSISNTLFSMDLAHYSSDKSHEFKGIIWGIMEESGRPNVVDFFPILRLLDPQGARRRMNGYFEKLISFFDGLVEERLRLRASKNESMACNNDVLDSVLELMLEDNSQVTRPHALHLFADLFVAGADTTSSTVEWAMTELLRNPEKLEKVKQEFEHILTNGEHIEESHISKLPYLQAVVKETFRMHPPAPLLLPRKSDIDAEIGGFMVPKSAQIMVNVWAMGRDSSIWTNPNQFLPERFLDTDTNFKGQHLELIPFGAGRRICPGLPFAFRTVHVTLASLLYNYDWKLADGIKPQDIDMSEIFGLTLHKAQPLRVVPILK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02137 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Cca01g02137 498 Gene3D Cytochrome P450 22 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 Pfam Cytochrome P450 32 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 496 - -
Cca01g02137 498 SUPERFAMILY Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02137 498 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02137 Cca-Chr1 48997334 49002965 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02137 7 498 Cytochrome P450 AT2G45550 47.390 5.48e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02137 - - gmx:100809483 773.081