Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02135 ATGGACTACCTTTCACTTCTTCTACTAATCACATTAGCATGGGTAAGCATTCATGTCCTAATCTCCATCTTCAAAACAATCAAATCCACCAAATACCCTCCAGGGCCTTTCCCTTTTCCAATCATAGGAAACATCTTGGAGCTTGGAAATCAACCTCACCAAGCACTTGCCAAGCTTTCTCAAATTTATGGTCCTATTATGACTCTTAAGCTTGGTCACACTACCACCATAGTTATTTCCTCTCCACAAGTTACAAAAGAGGTACTACAAAAACATGATCAAACCTTTGCTAACAGGTCAATCGCAGATACTATTCGAGCACTTGACCATCACGTGCTTTCGGTTGCATGGATGCCACCTTCAACACAATGGAGGAGCCTTAGGAGAGTTTGTGCCACCGAAGTCTTCTCTTCTTACCATCTTGATAACACAAAAGTTCTTCGCCAAAGGAAGGTGCAAGATTTGATGGATTATGTCAAGGAAAAATGCAACAAAGGTGAAGCTTTGGATATTGGTGAGGCATCCTTTACAACTGTGCTTAATTCCATATCAAACACTTTGTTCTCAATGGATTTGGCTCACTACTCTTCTTATAAGTCTCATGAGTTCAAGGACATCATTTGGGGTATCATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTATTTCCCAATCTTTGGCGCCCTTGATCCACAAGGTGCGCGGAGAAGAATGGATGGTTATTTTGGAAAGTTAATTGCGTTTTTTGATGAACTCTTAGAAGAAAGATTGCGTTTAAGGGCATCAAAAAATGAATCCAAGGTATGCAATGATGTGCTAGATTCTGTGCTGGAACTTTTGCTTGAAGACAATTCGCAAATCACCCGCCCTCATGTTTTGCACTTGTTTCTGGATTTATTTGTGGCTGGAATAGACACAACATCTTCCGCAATAGAATGGGCAATGGCTGAATTGCTTCGTAACCCAGAAAAACTAGAAAAAGTTAGGAAAGAGCTTAAAGGGGTCCTTGCCAAAGGTGAGGAGCTAGAAGAATCACATATCTCAAAGCTTCCTTACCTACAAGCAGTTGTGAAGGAAAGTTTTCGATTACATCCACCTATCCCAATGCTATTGCCACGCAAGTTACAAGTTGATGTTGAACTATGTGGCTTCATGCTGCCTAAAAGTGCACAAATTTTAATTAATGTATGGGCCATGGGAAGGGATTCAAGTATTTGGACAAACCCAAATCAATTTACACCTGAAAGATTCATGGAAAGTGACATTAATTTTAAAGGTCAAGATTTTGAGCTAATACCCTTTGGAGCTGGAAGAAGGATCTGTCCTGGGTTGCCATTGGCTTCTAGAACTATTCATGTTGTGTTGGCCTCTCTTCTTTACAACTATGATTGGAAGCTCAAGGATAAACAAAAGCCAGAAGACATGGATATATCTGAGAGTATTGGGTTAACCTTGCATAAGGCTCAACCTCTCCTAGTCATTCCCATCGAAGCATAG 1497 0.4075 MDYLSLLLLITLAWVSIHVLISIFKTIKSTKYPPGPFPFPIIGNILELGNQPHQALAKLSQIYGPIMTLKLGHTTTIVISSPQVTKEVLQKHDQTFANRSIADTIRALDHHVLSVAWMPPSTQWRSLRRVCATEVFSSYHLDNTKVLRQRKVQDLMDYVKEKCNKGEALDIGEASFTTVLNSISNTLFSMDLAHYSSYKSHEFKDIIWGIMEEAGRPNVVDYFPIFGALDPQGARRRMDGYFGKLIAFFDELLEERLRLRASKNESKVCNDVLDSVLELLLEDNSQITRPHVLHLFLDLFVAGIDTTSSAIEWAMAELLRNPEKLEKVRKELKGVLAKGEELEESHISKLPYLQAVVKESFRLHPPIPMLLPRKLQVDVELCGFMLPKSAQILINVWAMGRDSSIWTNPNQFTPERFMESDINFKGQDFELIPFGAGRRICPGLPLASRTIHVVLASLLYNYDWKLKDKQKPEDMDISESIGLTLHKAQPLLVIPIEA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02135 498 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 497 - -
Cca01g02135 498 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Cca01g02135 498 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 Gene3D Cytochrome P450 24 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 497 - -
Cca01g02135 498 Coils Coil 325 345 - -
Cca01g02135 498 Pfam Cytochrome P450 33 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02135 498 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02135 Cca-Chr1 48968254 48971302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02135 1 497 Cytochrome P450 AT2G45550 48.814 6.28e-177 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02135 - - gmx:100809483 830.091