Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02133 ATGGGCGAAAACCGAAAACGAGAATGGTCCCTGAGCGACTTCGAGATCGGGAAGCCTCTGGGCAAAGGGAAATTCGGCAGAGTGTACGTGGCCAGAGAAGTGAAGAGCAAATTTGTGGTTGCATTGAAAGTTATTTTCAAGGAACAGCTGGAGAAGTACAGAATTCATCATCAAGTGAGGAGGGAGATGGAGATTCAGATGAGTCTTCAGCATCCCAACGTTCTTCGTCTCTATGGTTGGTTTCATGACTCTGAGCGCGTCTTTTTGATTCTCGAATATGCTCACAATGGCGAGCTTTACAAGGAACTCAGCAAAAAGGGTCACTTTAGTGAGAACCAAGCTGCCACGTATATTTTAAGCCTTACAAAGGCTTTGGCATATTGTCACCAGAAGCATGTTATTCACAGAGATATCAAGCCTGAAAACTTGTTGCTCGACCATCAGGGTCGTCTTAAGATCGCAGACTTTGGTTGGTCAGTACAATCAAGAAGCAAAAGGCATACCATGTGTGGAACCTTGGATTATTTAGCACCCGAAATGGTAGAAAACAAAGCTCATGATTACGCAGTTGATAACTGGACTCTGGGTATCCTTTGTTATGAGTTCCTTTATGGTGCTCCTCCATTTGAGGCTGAGACTCAATCTGATACCTTCAAAAGGATAATGAAGGTTGACCTAAGCTTCCCTTCCACTCCTTTTGTTTCTTCAGAAGCCAAACATCTTATTAGTCGGCTTCTGGTAAAAGACTCTTCACAAAGACTCTCACTTCAGAGGATAATGGAACATCCTTGGATAATCAAGAATGCAAATCCCATGGGTGTCTGCAATTAG 831 0.4344 MGENRKREWSLSDFEIGKPLGKGKFGRVYVAREVKSKFVVALKVIFKEQLEKYRIHHQVRREMEIQMSLQHPNVLRLYGWFHDSERVFLILEYAHNGELYKELSKKGHFSENQAATYILSLTKALAYCHQKHVIHRDIKPENLLLDHQGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAETQSDTFKRIMKVDLSFPSTPFVSSEAKHLISRLLVKDSSQRLSLQRIMEHPWIIKNANPMGVCN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02133 276 ProSitePatterns Protein kinases ATP-binding region signature. 20 47 IPR017441 GO:0005524
Cca01g02133 276 Pfam Protein kinase domain 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g02133 276 SUPERFAMILY Protein kinase-like (PK-like) 7 269 IPR011009 -
Cca01g02133 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Cca01g02133 276 SMART serkin_6 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g02133 276 CDD STKc_Aurora 13 265 - -
Cca01g02133 276 Coils Coil 276 276 - -
Cca01g02133 276 PIRSF ILK 3 269 - -
Cca01g02133 276 Gene3D Transferase(Phosphotransferase) domain 1 98 273 - -
Cca01g02133 276 ProSiteProfiles Protein kinase domain profile. 14 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g02133 276 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 4 275 IPR030616 GO:0004672
Cca01g02133 276 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02133 Cca-Chr1 48949479 48951033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02133 14 271 CBL-interacting serine-threonine protein kinases AT5G10930 40.000 2.20e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Cca01g02133 Pkinase 4.4e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02133 K08850 - gmx:100775802 525.398