Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02130 ATGCCATCCATGGAGTTTCTTTCACATCCTTATTTCTTTGCAGCTTTGACCCTTTTAATGGTTCTAGTTGTGTTAAGAAATCTGAATAAAAGGCATGGAAAGAAGTACCACCCTATTGCTGGCACTGTGTTTAATCAGCTGCTGAACTTCAACAGGCTGCACCATTACATGACTCATCTTGCTGCCAAGTACAGGACATACAGGTTGCTCAACCTTTTCAGATATGAGGTTTACACTGCAGAGCCATGTAATGTTGAGTATATACTCAAAACCAATTTTGAGAATTATGGAAAGGGCTTGTACAACTACCACAATTTGAATGATTTACTGGGTGATGGGATTTTCACTGTTGATGGCGAGAAATGGCGTGAGCAAAGGAAGATCGCAAGTCATGAATTCTCCACCAAGATGTTAAGGGACTTAAGCATTTTAATATTCAGAAAGAATGCAGCAAAACTTGCAAACATAGTGTCTGAAGCTGCAACTTCTAATGATACATTGGAAATCCAAGACCTTTTAATGAAATCAACACTGGATTCAATTTTCCAAGTTGCATTTGGAACTGAACTTGACAGCATGTGTGGATCAAGTCAAGAAGGGAAGATTTTTGCTGATGCTTTTGATACTTCAAGTGCACTAGCCCTTTATCGTTATGTTGATGTCTTCTGGAAGATAAAGAAATTTCTGAATATTGGATCGGAGGCCAAATTAAGAAAGACTACTAAAATTTTAAATGAATTTGTTTTTAAGCTAATCAACAATAGAATTCAGCAAATGCAGATTTCAAAGGGAGGTTCTGAGAGGAAGCAAGGGGATATTCTGTCAAGGTTTCTGCAAGTGAAGGGATATGATTCAACATACTTGAGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACAACGGCTGCCACACTTGCTTGGTTCATGTACATGCTTTGTAAGTATCCTGCAGTTCAAGAAAAAGCAGCAGAAGAAGTGAACGAAGCAACAGAAACCAAAAAAATTAGTAGCTATACTGATTTTGTTTCTAGTGTCACGGATGAAGCTCTTGAAAAGATGAACTATCTCCATGCAGCAATTACTGAAACCCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATCTGTTTTTCTGATGATACATTACCAGATGGGTATAGTGTAAATAAAGGAGATATGGTATCTTACCAACCTTATGCAATGGGTCGGATGAAATTTATATGGGGTAATGATGCAGAGGATTTCAGACCAGAAAGATGGCTCGATGAGAATGGCACTTTTAAGCCAGAGAGCTCTTTCAAGTTTACAGCTTTTCAGGCTGGTCCTCGGATATGTCTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTCTCAGCAGTTTTGTTAGGCTGTTTTCGTTTCAAATTGAATGATGAGAAGAAAAATGTCACCTACAAGACGATGATTAATCTTCATATTGATGGAGGTCTTGAAATCAAGGCCTTCCACAGATACAGGGATTAG 1515 0.3822 MPSMEFLSHPYFFAALTLLMVLVVLRNLNKRHGKKYHPIAGTVFNQLLNFNRLHHYMTHLAAKYRTYRLLNLFRYEVYTAEPCNVEYILKTNFENYGKGLYNYHNLNDLLGDGIFTVDGEKWREQRKIASHEFSTKMLRDLSILIFRKNAAKLANIVSEAATSNDTLEIQDLLMKSTLDSIFQVAFGTELDSMCGSSQEGKIFADAFDTSSALALYRYVDVFWKIKKFLNIGSEAKLRKTTKILNEFVFKLINNRIQQMQISKGGSERKQGDILSRFLQVKGYDSTYLRDIILNFVIAGKDTTAATLAWFMYMLCKYPAVQEKAAEEVNEATETKKISSYTDFVSSVTDEALEKMNYLHAAITETLRLYPAVPVDAKICFSDDTLPDGYSVNKGDMVSYQPYAMGRMKFIWGNDAEDFRPERWLDENGTFKPESSFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMINLHIDGGLEIKAFHRYRD 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02130 504 Pfam Cytochrome P450 35 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PANTHER CYTOCHROME P450 15 502 - -
Cca01g02130 504 SUPERFAMILY Cytochrome P450 34 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 Gene3D Cytochrome P450 22 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02130 504 PANTHER CYTOCHROME P450-RELATED 15 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02130 Cca-Chr1 48857388 48863514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02130 4 501 Cytochrome P450 AT2G45510 50.881 4.15e-180 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02130 - - gmx:100789049 891.723