Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02121 ATGGCTTACCGAAACGGCGTCGCTCTCGCTCAGAGAGGAACCGCCGTCAAGTTCGACCGTCCAAACCACCTCCGAACGCCGTCGCTCAAGCCTCGCCTCCCTCACTCGCCGGGATCCGCCCTCCGCCGCTCCGCCGCCGCCACAACCGGAGACGGAGTGCCTGGAAGAGTTCGAGTGGCTGTAAGGTTGAGACCTCGAAATACTGAAGAAAGGATGGCTGATGCTGATTTTGCTGACTGTGTTGAATTACAGCCCGAGCTTAAAAGACTGAAACTCCGGAGAAACAATTGGGATTCAGATACTTATGAGTTTGATGAAGTGCTTACTGAATTTGCATCCCAGAAGCGTGTATATGAAGTTGTAGCTAAGCCAGTTGTTGAGAGTGTTCTCGATGGTTACAATGGAACTGTGATGGCTTATGGTCAAACTGGAACGGGCAAAACTTTTACTCTTGGACAATTGGGGGAGGAAGATATCTCTGATCGTGGTATCATGGTTCGTTCCATGGAGGATATCTTAGCCAACACATCTACAGAAACTGATTCTGTCACTGTGTCATATCTACAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCAGCAAATGATAATATTCCCATTGTGGAAGATCCAAAAACTGGTGATGTGTCTTTGCTTGGGGCTACTCTTGTGGAAATCAAGGATCAGCAAAGTTTCTTGGAGTTGCTAAGAGTAGGGGAAGCCCATCGAATTGCTGCCAACACAAAGTTGAATGCTGAATCTTCTCGTAGTCATGCTATACTGATGGTACATGTTAAGAGGTCTGTTGTGGATAGTGAAGATGTTGTTTCCACTGAAAATAATGATGCCTCTCGCTTGACTAAACTTTCAAAACCAGTCATTCGAAAGAGCAAGTTGGTTGTGGTAGATTTGGCAGGATCAGAGCGTATCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCCATCAATCTTTCACTTAGTGCATTGGGAAAATGTATTAATGCACTAGCAGAAAACAATGCTCATGTTCCATTTCGTGATTCAAAGCTTACTAGGTTGCTCAGAGATTCCTTTGGAGGAACAGCAAGAACTTCATTGATTGTTACTATTGGCCCATCTCCACGTCATCGAGGAGAGACTTCTAGTACTGTATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAACATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGTCTGTCTCGGAGGCTTGAGGTACAATTAGATAACCTTATTGCAGAAAATGAAAGGCAGCAGAAGGCTTTTGAGGATGAAATTGAAAGAATAAATTTGGAGGCACAATGTCGTATATCCGAGGTTGAGAGAAAATTTGCAGATGCATTAGAGAAAGAGAGATTGAAATGCCAGATGGAGTACATGGAGTCAGTTAAGCAGCTGGAACAGAAGTTGGTGTCAAATGAGGAAAGACATGGCAACAATTGTTTTGTGGATGGTTGTAGAGAGGGCCCAAGACAATCTTCTGTGGATGAAGTTGTTGAGATCAAAATGCTGTTTGAAAATGAATGCAATAGGAGAAAGGCAGTGGAAGCAGAGGTAGAACATCTAAAATATCTAATGGGGAAACACACACAGAGAGAGGCAGGAGGGGATGCAGAGGTTATAAAGGTTCACAGCGTTCTGGGGGATGAAACTAATCAGAAAAAGAAACTTGAAGAAGAAATAATAATATTAAGAAGTCAATTGTTGCAATTGAACTTTGAAGCTGAGCAGATGAGAAGATGTTTGGGAAGTGAAAGCTCTGTAAATGCATCCTCTGCCATGGATTCTTCAATGTCTCATGTTAGGCATTCTCAACTCAAAGAGACTGGGAATGGACAGAAGGCATCTGTTGCTGCACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCGTTCCTGGAGTCAGATGATCCCAATGTTCGGATTCATGCTGTTAAAGTGGTGGCCAACCTTGCGGCGGAAGAGGTGAATCAAAAAAGTATTGTTGAAGCTGGTGCTCTTACTTCCTTGCTGATGCTTCTTAGAAGATATGAGGATGAAACTGTTCACAGAGTAGCAGCAGGGGCAATTGCCAATCTTGCCATGAATGAAGCCAATCAAGAACTTATAATGGCTGAAGGGGGAATCACTCTGTTGTCAATGACTGCATCAGATGCTGAAGAACCACAAACTCTTCGAATGGTTGCTGGTGCCATAGCTAACCTATGTGGAAATGATAAAATATTGATGAAGTTGAGATCCCAGGGAGGTATTAAGGCTTTATTGGGAATTGTAAGATGTGGACATCCTGATGTTCTTTCACAAGTTGCACGAGGAATTGCCAACTTTGCCAAATGCGAATCTCGAGCTTCTAGTCAAGGGATGAAAAGTGGTAGATCCTTTTTGATAGAAGATGGTGCACTTCCATGGATAGTACAGAATGCTAACAATGAAGCTGTACCAATAAGGCGTCACACTGAACTTGCACTTTGCCACATGGCACAGCATGAAGTGAATGCAAAAGACATGATCAGTGGAGGTGCCCTTTGGGAGCTTGTCCGAATTTCAAGGGATTGTACGCGAGAGGACATAAGGAATCTTGCTCGCCGGACTCTCAATACTATCCTACCATTCAAATCTGAATTGCGGCGATTACGCATAGACTGTTGA 2688 0.4356 MAYRNGVALAQRGTAVKFDRPNHLRTPSLKPRLPHSPGSALRRSAAATTGDGVPGRVRVAVRLRPRNTEERMADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGQLGEEDISDRGIMVRSMEDILANTSTETDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPKTGDVSLLGATLVEIKDQQSFLELLRVGEAHRIAANTKLNAESSRSHAILMVHVKRSVVDSEDVVSTENNDASRLTKLSKPVIRKSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENNAHVPFRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETSSTVLFGQRAMKVENMLKIKEEFDYKSLSRRLEVQLDNLIAENERQQKAFEDEIERINLEAQCRISEVERKFADALEKERLKCQMEYMESVKQLEQKLVSNEERHGNNCFVDGCREGPRQSSVDEVVEIKMLFENECNRRKAVEAEVEHLKYLMGKHTQREAGGDAEVIKVHSVLGDETNQKKKLEEEIIILRSQLLQLNFEAEQMRRCLGSESSVNASSAMDSSMSHVRHSQLKETGNGQKASVAALFEQVGLQKILSFLESDDPNVRIHAVKVVANLAAEEVNQKSIVEAGALTSLLMLLRRYEDETVHRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEEPQTLRMVAGAIANLCGNDKILMKLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASSQGMKSGRSFLIEDGALPWIVQNANNEAVPIRRHTELALCHMAQHEVNAKDMISGGALWELVRISRDCTREDIRNLARRTLNTILPFKSELRRLRIDC 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02121 895 Coils Coil 414 463 - -
Cca01g02121 895 PANTHER KINESIN-RELATED 38 881 IPR027640 GO:0003777|GO:0007018
Cca01g02121 895 PRINTS Kinesin heavy chain signature 132 153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g02121 895 PRINTS Kinesin heavy chain signature 299 317 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g02121 895 PRINTS Kinesin heavy chain signature 348 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g02121 895 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 637 679 IPR000225 GO:0005515
Cca01g02121 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 434 IPR027417 -
Cca01g02121 895 SMART arm_5 667 708 IPR000225 GO:0005515
Cca01g02121 895 SMART arm_5 626 666 IPR000225 GO:0005515
Cca01g02121 895 SMART arm_5 751 791 IPR000225 GO:0005515
Cca01g02121 895 SMART arm_5 709 750 IPR000225 GO:0005515
Cca01g02121 895 ProSitePatterns Kinesin motor domain signature. 298 309 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca01g02121 895 Coils Coil 469 489 - -
Cca01g02121 895 Coils Coil 560 587 - -
Cca01g02121 895 Pfam Kinesin motor domain 62 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g02121 895 ProSiteProfiles Kinesin motor domain profile. 56 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca01g02121 895 Gene3D - 593 891 IPR011989 -
Cca01g02121 895 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 678 721 IPR000225 GO:0005515
Cca01g02121 895 Gene3D Kinesin motor domain 51 428 IPR036961 -
Cca01g02121 895 CDD KISc 56 396 - -
Cca01g02121 895 Pfam Armadillo/beta-catenin-like repeat 670 707 IPR000225 GO:0005515
Cca01g02121 895 MobiDBLite consensus disorder prediction 21 52 - -
Cca01g02121 895 PANTHER KINESIN-LIKE PROTEIN 38 881 IPR033291 GO:0008017|GO:0032886|GO:0048364
Cca01g02121 895 SUPERFAMILY ARM repeat 627 889 IPR016024 -
Cca01g02121 895 SMART kinesin_4 54 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02121 Cca-Chr1 48724695 48737378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02121 41 400 Calmodulin-binding Proteins AT5G65930 35.215 3.64e-45 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02121 - K10396 gmx:100793472 1550.03