Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02108 ATGGAGGCAGATGCGCTGAAAAGTGGTGGTGGCAGCAATGCATCCAATCCTGTTCTCTATTCTTTCAGCCAAAGCTCTTGCTCATGGCGTATCCGCTTTGCTTTATGCCTCAAAGGGATCCCATATGAGTGCAAAGAAGTGGATCTTTCAAAAGGAGAGCAGTACAGTCCAGAGTTCGAGAAATTGAACCCTCTGCACTATGTTCCAGTATTAGTTGATGATAATGTGGTGGTTTCAGACTCTTATGCAATATTTTTGCATTTGGAGGAAAAATATGCTCAGAAGCCACTGTTGCCAGTTGATCCTCAGCTCAGAGCTCTCAATCTTCAGGTAGCAAGTATTGTTCACTCTAGTATACAGCCTCTTCACATGCTTAATGTTCTGAAAGATATGGAGAAAATGTTTGGTGCGGAATCAAAACCATGGGCCCAATTTACCATTGACAAAGGTTTCTCAGCTCTTGAAAAGTTACTGAAGGATTTTGCTGGTACATATGCCACAGGGGAACATATCTATATGGCTGATGTATTTTTGGCCCCACAGATTACACAGGCGGTTCAGAGGTTTGATATTGATATGTCCAAATTTCCTATCCTGAGTAGATTGTATGAAACATACAAAGCTCTGCCAGAGTTCCAAACCTCATCACCACAAAGACAACCTGCTGCCTGCATTCATAACCCCTGA 687 0.4265 MEADALKSGGGSNASNPVLYSFSQSSCSWRIRFALCLKGIPYECKEVDLSKGEQYSPEFEKLNPLHYVPVLVDDNVVVSDSYAIFLHLEEKYAQKPLLPVDPQLRALNLQVASIVHSSIQPLHMLNVLKDMEKMFGAESKPWAQFTIDKGFSALEKLLKDFAGTYATGEHIYMADVFLAPQITQAVQRFDIDMSKFPILSRLYETYKALPEFQTSSPQRQPAACIHNP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02108 228 SUPERFAMILY GST C-terminal domain-like 96 222 IPR036282 -
Cca01g02108 228 TIGRFAM maiA: maleylacetoacetate isomerase 19 223 IPR005955 GO:0003824|GO:0005737|GO:0009072
Cca01g02108 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 15 96 IPR004045 -
Cca01g02108 228 Pfam Glutathione S-transferase, N-terminal domain 19 96 IPR004045 -
Cca01g02108 228 CDD GST_C_Zeta 102 220 IPR034330 -
Cca01g02108 228 Gene3D Glutaredoxin 19 95 - -
Cca01g02108 228 PANTHER MALEYLACETOACETATE ISOMERASE 10 223 - -
Cca01g02108 228 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 10 223 - -
Cca01g02108 228 Gene3D - 98 224 - -
Cca01g02108 228 SFLD Main (cytGST) 19 207 - -
Cca01g02108 228 Pfam Glutathione S-transferase, C-terminal domain 146 203 - -
Cca01g02108 228 SFLD Glutathione Transferase (cytosolic) 19 207 IPR040079 -
Cca01g02108 228 SUPERFAMILY Thioredoxin-like 14 99 IPR036249 -
Cca01g02108 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 101 225 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02108 Cca-Chr1 48495593 48500277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02108 19 221 Glutathione S-transferase Gene Family AT2G02380 50.490 1.26e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02108 K01800 - gmx:100796296 391.734