Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02083 ATGGCACAACTCAACTTCACATTGTTGGTCATTTTTCTCTCTCTCATCTATTCAACTCTTGCCACCCCAATTGAGCCATCATCATTGGCAAGGCAAAAAAACTCTCAAACAATGACCTACATAGAGTCCTCTTGTAATGGCACCCTCTACCCTAATCTTTGTATTCGTTGTCTGGCCCAATATGTCAAATCTACCGTAAACAGTCCACAACACTTAGCCCAATATGCATTATTAGCAAGCCTCTCTAGAGCAGTGCACACAAGAGGATATCTTTTGAAAGTTGCCAAGGAACTTAAATCCATCAAGAACAACAAAAGAGAATACCTAATTGTTCAAGATTGTGTGAACCAAATCACTGATAGTGTGAACCAACTTAGCCAAGCCATGAAAGAACTACGCAGGTTGAACAAACGTGGGTCCACCATCAATGATGACATGTTGTGGCACATAAGCAATATTGAGACATGGGTGAGCACTGCCTTAACAGATGCTAGTAGTTGTGTGTACTCATTTCCTGGCCATAGGATGAGTAAAAGAACAGCTGCTATTAAGGTTAAGGCCATGAATGTAGCGGAACATACTAGTAATGCATTTTTCTTGTTTCAAAGATATGCATCTAGGTATCGGAAAGAAGCAACCATAACCACCAACAAGCCCTAG 660 0.4091 MAQLNFTLLVIFLSLIYSTLATPIEPSSLARQKNSQTMTYIESSCNGTLYPNLCIRCLAQYVKSTVNSPQHLAQYALLASLSRAVHTRGYLLKVAKELKSIKNNKREYLIVQDCVNQITDSVNQLSQAMKELRRLNKRGSTINDDMLWHISNIETWVSTALTDASSCVYSFPGHRMSKRTAAIKVKAMNVAEHTSNAFFLFQRYASRYRKEATITTNKP 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02083 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 203 IPR035513 -
Cca01g02083 219 PANTHER BNAANNG18590D PROTEIN 2 208 - -
Cca01g02083 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 202 IPR006501 GO:0004857
Cca01g02083 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 208 - -
Cca01g02083 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 204 IPR035513 -
Cca01g02083 219 Coils Coil 115 138 - -
Cca01g02083 219 CDD PMEI-like_3 43 206 - -
Cca01g02083 219 Pfam Plant invertase/pectin methylesterase inhibitor 40 197 IPR006501 GO:0004857
Cca01g02083 219 SMART PMEI_2 36 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02083 Cca-Chr1 48159560 48160257 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02083 41 217 Carbohydrate Esterase AT3G14310 22.527 5.39e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02083 - - gmx:100791798 363.614