Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g02081 | ATGGCACAACTCAACCTCACATTAGTCATTTTCCTCTCTCTCCTCTTTTCAATTCTTGCCACCCCAGTTGAGCCATCAACATTGACAAGGCACAAAAATTCCCAAACAATGACCTATATAGAGTCCTCTTGCAATGGCACCCTCTATCCTAATCTTTGCATCCGTTGTTTGGCTCAATATGTCAAATCCACCATAAATAGTCCACAACACTTAGCCCAATATGCATTGTCGGTGAGTCTCTCTAGAGCATTACACACAAGAGTGTACCTTTTGAAAGTGGCCAAAGAACTTAAAGCCATCAAAAATAGCAAAAGAGAGTATCAAATTGTTCAAGATTGTGTGAATCAAATCACTGATAGTGTGAACCAAATTAGTCAAGCTATGAAAGAATTACGTAAGTTGAACAAACGTGAGTCCACCATCGATGATAATATGTTGTGGCACATAAGCAACGTTGAGACATGGGTGAGTACTGCCTTAACAGATGCTAGTAGTTGTGTATACTCATTTCCTGGAAATAGGATGAGTAAGAGAGCAGCTGCTATTAAGGTCAAGGCCATGGATGTGGCGGAACATACTAGTAATGCATTGTTCTTGTTTCATAAATATGCATCTAGGTATCAGAAAGCAGCAACTAGAACCACCAAGAAGCCCTAG | 657 | 0.4018 | MAQLNLTLVIFLSLLFSILATPVEPSTLTRHKNSQTMTYIESSCNGTLYPNLCIRCLAQYVKSTINSPQHLAQYALSVSLSRALHTRVYLLKVAKELKAIKNSKREYQIVQDCVNQITDSVNQISQAMKELRKLNKRESTIDDNMLWHISNVETWVSTALTDASSCVYSFPGNRMSKRAAAIKVKAMDVAEHTSNALFLFHKYASRYQKAATRTTKKP | 218 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g02081 | 218 | CDD | PMEI-like_3 | 42 | 205 | - | - | |
Cca01g02081 | 218 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 9 | 203 | IPR006501 | GO:0004857 | |
Cca01g02081 | 218 | SMART | PMEI_2 | 35 | 199 | IPR006501 | GO:0004857 | |
Cca01g02081 | 218 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 39 | 203 | IPR035513 | - | |
Cca01g02081 | 218 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 5 | 206 | - | - | |
Cca01g02081 | 218 | Pfam | Plant invertase/pectin methylesterase inhibitor | 39 | 197 | IPR006501 | GO:0004857 | |
Cca01g02081 | 218 | PANTHER | BNAANNG18590D PROTEIN | 5 | 206 | - | - | |
Cca01g02081 | 218 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 35 | 203 | IPR035513 | - | |
Cca01g02081 | 218 | Coils | Coil | 114 | 137 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g02081 | Cca-Chr1 | 48151964 | 48152754 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g02081 | 40 | 197 | Carbohydrate Esterase | AT1G53830 | 23.270 | 9.12e-10 | 55.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g02081 | - | - | gmx:100791798 | 349.747 |