Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02071 ATGTCACCACTTGTGTTAGTTCTGTGCCTTACTCTTCCTGTGTTCTTGTTATTCTTCTTTCGATACCCTAGAACCTTGAAGAACAAGAACCAACTCCATCCACCTGGTCCTAGAGGCCTTCCCATATTAGGGAATCTCCATCAATTAGACAACTCTAATTTTCATGTGCAGCTATGGCAACTCTCAAAGAAGTATGGGCCATTATTTTCCCTTCAACTAGGTTTAAGGCCAGCCATAGTTATTTCCTCACCTAAAGTGGCCAAAGAGGCACTTAAAAACCATGACGTTGAGTTTAGTGGACGACCAAAATTGCATGGCCAACAGAGACTCTCCTACAACGGAATAGACATGTCATTTTCCCCATACGGCACTTATTGGAGAGAAATCAGAAAACTCTGTGTTGTCCATGTCCTTAGCTCTAGACGTGTCTCAAGCTTTTCACCAATAAGACACTTTGAGGTCAAGCACATGATAAACAAGATATCTGGGCATGCCTCATCTTCAACTGTTACGAATTTGAATGAAGTATTGATATCCCTTACTAGTGCAATTATATGCAGAACTGCATTTGGGAGAAGGTACGAAGATGAAGGAAATGAAAGGAGTAGGTTCCATGGGCTTCTCAATGAGTGTGAGGCCATGATGGGTGTCTTGTTTGTTTCAGATTATATCCCGTTTTTGGGTTGGGTTGATAAACTCACGGGGTTGCGTACTCGTCTTGAGAAAAGTTTCAAGGAGTTGGATGAGTTTTCCCAAGAGGTCATCGAGGAACACATGGATCCAAATAGAAAATCTTCAGAGGAAGAGGATATAATTGATGTCTTACTTCAACTAAAGAAGCAGCGTTCGTTTTCCACAGATCTCACTATTGATAACATCAAAGCTGTGTTCATGGACTTGCTTATAGCAGCAACGGATACTACTGCATCAACAGCAGTTTGGGTTATGACAGAACTAGTAAAACACCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGAAACTGGGAAGATAAGAAAGATTTCATCGATGAAGATGAGACTCAGAATTTTCCATATTTTAAGGCAGTGATAAAAGAAACACTGAGACTACATCCACCATTGGCACTCCTTGTACCAAAAGAGACAAATAAAAGATGCATCATAGAAGGTTATGAAATTGCAGCCAAAACATTAGTATATGTGAATGCTTGGGCTATACATAGAGATCCTGACACTTGGAAAGAACCAGAAGAGTTTTTACCTGAGAGGTTCTTAGACAGTACCATAGATTTTCGAGGTCAAGATTTTGAGTTAATTCCATTTGGTGCTGGTCGTAGAAGTTGTCCAGGTATACTTATGGCAATCGCCTCATTGGATCTTATACTCGCAAATCTTCTTTATTTCTTTGATTGGGAATTGCCACCTGGGATAAAAAAAGAAGACATTGATACTGAAGTCTTGCCAGGACTTGTGCAGTATAAGAAGAATCCTCTTTGTGTTTTGGCCAAATGTCACATGTAA 1503 0.3992 MSPLVLVLCLTLPVFLLFFFRYPRTLKNKNQLHPPGPRGLPILGNLHQLDNSNFHVQLWQLSKKYGPLFSLQLGLRPAIVISSPKVAKEALKNHDVEFSGRPKLHGQQRLSYNGIDMSFSPYGTYWREIRKLCVVHVLSSRRVSSFSPIRHFEVKHMINKISGHASSSTVTNLNEVLISLTSAIICRTAFGRRYEDEGNERSRFHGLLNECEAMMGVLFVSDYIPFLGWVDKLTGLRTRLEKSFKELDEFSQEVIEEHMDPNRKSSEEEDIIDVLLQLKKQRSFSTDLTIDNIKAVFMDLLIAATDTTASTAVWVMTELVKHPRVMKKVQEEIRNWEDKKDFIDEDETQNFPYFKAVIKETLRLHPPLALLVPKETNKRCIIEGYEIAAKTLVYVNAWAIHRDPDTWKEPEEFLPERFLDSTIDFRGQDFELIPFGAGRRSCPGILMAIASLDLILANLLYFFDWELPPGIKKEDIDTEVLPGLVQYKKNPLCVLAKCHM 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02071 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Cca01g02071 500 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 SUPERFAMILY Cytochrome P450 34 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 Pfam Cytochrome P450 34 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 500 - -
Cca01g02071 500 Gene3D Cytochrome P450 26 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g02071 500 PANTHER CYTOCHROME P450 71B11-RELATED 4 500 - -
Cca01g02071 500 Coils Coil 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02071 Cca-Chr1 47968198 47970200 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02071 4 500 Cytochrome P450 AT4G31500 46.400 2.21e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02071 - - ccaj:109815551 989.949