Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02062 ATGGCTTACGCAGTCTCAGAAACTGATGCTGCAAAGGCCCCACAGGCACCAGATGGTGTTGAATCATACATAACGGAGATGTTCCTCAGGGGAAAAAAATATTACCTCTATGTACACAGTTACTTGCGCTACGGTTTGCCAGCTCGTGCAGAGGTTTTAAAGGTTTCTCGCAATGCCGAAAACCCTTGTATTTTGGCTGGTTTTGATGTTCCATAA 216 0.4491 MAYAVSETDAAKAPQAPDGVESYITEMFLRGKKYYLYVHSYLRYGLPARAEVLKVSRNAENPCILAGFDVP 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02062 71 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 1 69 IPR000407 GO:0016787
Cca01g02062 71 Gene3D Exopolyphosphatase. Domain 2 1 71 - -
Cca01g02062 71 PANTHER APYRASE-LIKE PROTEIN 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02062 Cca-Chr1 47835953 47836438 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02062 1 68 Calmodulin-binding Proteins AT3G04080 60.870 8.35e-24 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02062 K14641 - gmx:100787491 122.479