Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g02014 ATGTTCCACTCAAATGATTCTGGTTGGAGAGAATGCACTTCATGTGACAAGCGTCTCCATTGTGGATGCATTGCTTCTATGTCTCAGCTTGAATTATTAGATATTGGTGGTGTAAGCTGTATAAACTGTGCAAGGAATTCAGGATTGCAACCTATTGCAAGCAACGAAAAGCCTAGTGGATCTGGGACATCAAAGGTAAACAATGTTGGTGCACAGCAGTATACATCTCTGGCTAACCTAATTCTATTAAAACTCGACTGTATATGA 267 0.4007 MFHSNDSGWRECTSCDKRLHCGCIASMSQLELLDIGGVSCINCARNSGLQPIASNEKPSGSGTSKVNNVGAQQYTSLANLILLKLDCI 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g02014 88 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 50 - -
Cca01g02014 88 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL2 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g02014 Cca-Chr1 47044507 47045343 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g02014 1 49 B3 DNA Binding Superfamily AT4G32010 69.388 1.82e-20 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g02014 - - gmx:100778833 152.525