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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca01g01990
ATGGATTCTAGGCGGCGTAAAAATGCAGCTATGCAAGGCAAGTTGCAACAGCTTCGATCGGTCACAAATTCCAGTGCTGTTAACAAAGCCTCAATTATTGTGGATGCCACCAGATACATAGAGGAGTTGAAGCAAAAAGTGGACGGATTGAACTCAGAGCTTGGAACCGCTGAATCATCATCAATCTCCCAAGACGAACTACCCATGGTCACCGTGGAAACCCTAGAAAGGGGTTTTCTCATTAATGTGTTTTCAGAAAGGAATTGCCCCGGCATGCTTGTGGCAATACTCGACGCCTTCGAAGAACTGGGACTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTTCAGCTTGAAGCGGTTGGAGGAGAAAGTCAAGAGAACGAAAGCATCGACGCGCAAGTGGTGAAGCAAGCAGTGCTGCAAGCGATCCAAAACATGGATTAA
453
0.4658
MDSRRRKNAAMQGKLQQLRSVTNSSAVNKASIIVDATRYIEELKQKVDGLNSELGTAESSSISQDELPMVTVETLERGFLINVFSERNCPGMLVAILDAFEELGLDVLDARVSCEDTFQLEAVGGESQENESIDAQVVKQAVLQAIQNMD
150
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca01g01990
150
Gene3D
-
1
65
IPR036638
GO:0046983
Cca01g01990
150
PANTHER
TRANSCRIPTION FACTOR SCREAM2-RELATED
1
150
-
-
Cca01g01990
150
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
5
57
IPR036638
GO:0046983
Cca01g01990
150
CDD
ACT_UUR-ACR-like
90
146
-
-
Cca01g01990
150
ProSiteProfiles
ACT domain profile.
81
150
IPR002912
-
Cca01g01990
150
PANTHER
TRANSCRIPTION FACTOR BHLH FAMILY-RELATED
1
150
-
-
Cca01g01990
150
Coils
Coil
33
60
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca01g01990
Cca-Chr1
46469446
46471369
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca01g01990
11
144
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT5G10570
26.667
2.02e-06
44.3
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca01g01990
-
-
gmx:100500546
268.085
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca05g01655
05
35938490
35939978
Cca01g01990
01
46469446
46471369
ECH
Cca07g01714
07
43133252
43135320
Cca01g01990
01
46469446
46471369
ECH
Cca01g01990
01
46469446
46471369
Cca05g01655
05
35938490
35939978
ECH
Cca01g01990
01
46469446
46471369
Cca01g01990
01
46469446
46471369
ECH
Cca05g01331
05
31330512
31332682
Cca01g01990
01
46469446
46471369
ECH
Cca01g00600
01
7646423
7648577
Cca01g01990
01
46469446
46471369
ECH
Cca01g01990
01
46469446
46471369
Cca05g01331
05
31330512
31332682
ECH
Cca01g01990
01
46469446
46471369
Cca01g00600
01
7646423
7648577
ECH
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