Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01954 | ATGGCACATTCTTCTTCAGGATCTTCTCAAATAAAACATGTTCTCTCTCTTTGTCTCCTACTTATTTCGGGATTGTCAGGGTGTGCATCAAAGCAAATGTCAGATAGCATTCCTCAAATAAAGTATGACGTTTTTGTTAACTTTAGGGGCGAGGACGTTCGTCGCGGTTTTCTTGGTTATTTGACTGAGTCTTTTCATCAAAAGCAAATATCTGCCTTTGTAGATACTAAACTTGAGAAGGGGGATGAAATATGGCCTTCAATTGTTAGAGCAATTCAAGGATCATTGATTTCGTTGATTATATTCTCTAGAAACTATTCCTCTTCACGTTGGTGTTTGGAAGAACTTGTGAAAATACTTGAGTGCAGGGAGAAATACAACCAAACTGTAATACCTGTTTTCTACCATGTAAATCCCACATATGTACGACATCAAAAGGGGACTTATGGAAAAGCTCTTGATGAACATGAAAAGAAATATAATTTGACCTCAGTGCAAAACTGGAGACATGCTTTGAAGAAGGCTGGCAATATATCGGGAATAAAGTCCTTCGATTACAAgacagaagttgagctccttggagaaatcatcaatattgttaatcttgtgttgatgagtttggataagcacccatttaacttaaaaggacttgtgggagtcgacaaaccaattcaacatttggaatcattgttataccaagagtcaaaatatgtccgtgtcattggaatttggggtatgggtggtattggaaagacaactattgccgaagaaatatttaagaaattatattccgaatatgatcggtattattttctggcagatgtagatgaagaatcaataagacatggaacaatttatttgaaggaaaaccttttctctgcactacttgaagaaaaagtgaaaatcaacatagtgcatggattgtcaaattatattaagagaaagatcagtcgtatgaaggttttaatcgttcttgatcatgtgaatgattcaaatctgctagaaaaattgtttggaagccatgattggtttggacgaggcagtagaatcattataacaaccagagataaacaagttcttattgctaataaagttgatgatatatatcatgttggggcattgaactctggtgaagcacatgaaatttttactttgtatgcctttaaccaaaatcattttgatatggagtattacaagctatcaaagagggtggtcaattattctcaaggcattccattagttcttaaagttttgggacatcttctttgtgggaaagataaggaagtatgggagagtcaactagacaaactaaaaaacatgccaaatagagatatttacaatacaatgagattaagttatgatgatctagaccgcaaagaacaaaagattcttttggatcttgcatgtttttttatgggattgaatttgaaagtggaccgcataaaagttttattgaaagatagtgaaagagatgtttcggtagttgctggattagaaaggttgaaagataaagctcttataaccatttctgaagataatgttatatccatgcacgatatcatacaagaaatggcttgggagattattcgtcatgaatccattgaagagcctggaaaccgtagccgattgagtgatcctcatgatatttatgaagtattgaaatataacaagggaactgaggccataagaagcataagggcagatttgtcagtaattaggaagctgcagttaagccctcacgtatttactaagatgagtaaactacagtttttgtattttcctagtaaatataatcaagatggcttttctcttcttcctcacgggcttgaatcttttccagttgagctaagatatcttggttggatgcgttaccctctgaaatccttgccagagaatttttctgctgaaaaccttgttatattggatttgtcatatagccaagtggagaaactttggaatggagtgcagaatttgatgaatttgaaagaaattaaagtctctggttctgaaaatttgaaggagctgccagacctttcaaaagccacaaatcttgaagtgctagatatcaaattttgtcctctgttgactaaagtggctccatctattctctcactcaacaagcttgagagattgtatctagctttttgttcccttactaaaatttcaagcgagaaccacctaaggtcccttagttatctcaatcttcaatcatgcaaaaaactaagggaattttcagtgacatcagagaacatgattgaacttgatttatcatcaactcgtgtcaatgccttgccctcatcttttggaaatcaaaggaagctcgaaatcctgtggctaagagacagtggcatcgagtgttttccttcaagcttcaagaatctttcaagactgcgacatctgaatgtatataattccaaggagcttcatactctaacagaacttcccccatcccttgaaattctagatgccacagattgcacatcattgaagtctgtgccatcaatttctgaacagttcaatgaaaacaggagagaggttctattttggaattgcttgaaattggatgaacattctctcaaggctattgtgttcaatgcacacattaatgtgatgaaatttgcatatcaacatttatctgcacctgatcaaaattccgatgattacgatcatacttatgaatctgatcaagtaaagtatgtgtatccaggaagtagtgttccacagtggatggagtataaaacaacaaaggattatataattattgatctctcttctactccacactcctctcagttaggcttcatttttggctttgttatctctggtcctatggtgaaggcaataattggttatagatttacgttttatatcactgtgaatgatgatgaggatgaaagtaaaaagaatactatcgacataaacatgtctgactcaattgtttgggttgcatcggatcatgtgtgtttgatttatgaccaaagatgttctcactacctaaacagtaaagccaaaaatcaaacaaggtttaaaatcaaggttgaagcgatggcagctgcggtagctcatcaacgggacgtggggttaaaagggtttggagtcagcctaataaacaccatagcatataacaatttcattcaagaaatgAACACCTTATCAGATCATAGTTTCATTCAAGAAATAAACTCCTCAGCAGATCGTAGTTTCATTCATCAAGTAAACACCTCAACAGATCACAGTTTCGTTCAAGAAATAAACACCTCAGCAGATCACAGTTTCAATGTTCAACAAATGGAA | 3294 | 0.0798 | MAHSSSGSSQIKHVLSLCLLLISGLSGCASKQMSDSIPQIKYDVFVNFRGEDVRRGFLGYLTESFHQKQISAFVDTKLEKGDEIWPSIVRAIQGSLISLIIFSRNYSSSRWCLEELVKILECREKYNQTVIPVFYHVNPTYVRHQKGTYGKALDEHEKKYNLTSVQNWRHALKKAGNISGIKSFDYKTEVELLGEIINIVNLVLMSLDKHPFNLKGLVGVDKPIQHLESLLYQESKYVRVIGIWGMGGIGKTTIAEEIFKKLYSEYDRYYFLADVDEESIRHGTIYLKENLFSALLEEKVKINIVHGLSNYIKRKISRMKVLIVLDHVNDSNLLEKLFGSHDWFGRGSRIIITTRDKQVLIANKVDDIYHVGALNSGEAHEIFTLYAFNQNHFDMEYYKLSKRVVNYSQGIPLVLKVLGHLLCGKDKEVWESQLDKLKNMPNRDIYNTMRLSYDDLDRKEQKILLDLACFFMGLNLKVDRIKVLLKDSERDVSVVAGLERLKDKALITISEDNVISMHDIIQEMAWEIIRHESIEEPGNRSRLSDPHDIYEVLKYNKGTEAIRSIRADLSVIRKLQLSPHVFTKMSKLQFLYFPSKYNQDGFSLLPHGLESFPVELRYLGWMRYPLKSLPENFSAENLVILDLSYSQVEKLWNGVQNLMNLKEIKVSGSENLKELPDLSKATNLEVLDIKFCPLLTKVAPSILSLNKLERLYLAFCSLTKISSENHLRSLSYLNLQSCKKLREFSVTSENMIELDLSSTRVNALPSSFGNQRKLEILWLRDSGIECFPSSFKNLSRLRHLNVYNSKELHTLTELPPSLEILDATDCTSLKSVPSISEQFNENRREVLFWNCLKLDEHSLKAIVFNAHINVMKFAYQHLSAPDQNSDDYDHTYESDQVKYVYPGSSVPQWMEYKTTKDYIIIDLSSTPHSSQLGFIFGFVISGPMVKAIIGYRFTFYITVNDDEDESKKNTIDINMSDSIVWVASDHVCLIYDQRCSHYLNSKAKNQTRFKIKVEAMAAAVAHQRDVGLKGFGVSLINTIAYNNFIQEMNTLSDHSFIQEINSSADRSFIHQVNTSTDHSFVQEINTSADHSFNVQQME | 1098 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01954 | 1098 | Gene3D | - | 373 | 457 | IPR042197 | - | |
Cca01g01954 | 1098 | SUPERFAMILY | "Winged helix" DNA-binding domain | 444 | 554 | IPR036390 | - | |
Cca01g01954 | 1098 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 37 | 1051 | IPR044974 | GO:0006952 | |
Cca01g01954 | 1098 | PRINTS | Disease resistance protein signature | 725 | 741 | - | - | |
Cca01g01954 | 1098 | PRINTS | Disease resistance protein signature | 315 | 329 | - | - | |
Cca01g01954 | 1098 | PRINTS | Disease resistance protein signature | 408 | 422 | - | - | |
Cca01g01954 | 1098 | PRINTS | Disease resistance protein signature | 240 | 255 | - | - | |
Cca01g01954 | 1098 | ProSiteProfiles | TIR domain profile. | 40 | 204 | IPR000157 | GO:0007165 | |
Cca01g01954 | 1098 | Pfam | NB-ARC domain | 227 | 447 | IPR002182 | GO:0043531 | |
Cca01g01954 | 1098 | Pfam | Leucine Rich Repeat | 637 | 656 | IPR011713 | - | |
Cca01g01954 | 1098 | Gene3D | Ribonuclease Inhibitor | 551 | 749 | IPR032675 | - | |
Cca01g01954 | 1098 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 211 | 467 | IPR027417 | - | |
Cca01g01954 | 1098 | Pfam | TIR domain | 41 | 188 | IPR000157 | GO:0007165 | |
Cca01g01954 | 1098 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 36 | 180 | IPR035897 | - | |
Cca01g01954 | 1098 | SMART | till_3 | 41 | 178 | IPR000157 | GO:0007165 | |
Cca01g01954 | 1098 | Gene3D | - | 207 | 368 | IPR027417 | - | |
Cca01g01954 | 1098 | Gene3D | - | 39 | 206 | IPR035897 | - | |
Cca01g01954 | 1098 | SUPERFAMILY | L domain-like | 567 | 857 | - | - | |
Cca01g01954 | 1098 | PANTHER | DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) | 37 | 1051 | - | - | |
Cca01g01954 | 1098 | Gene3D | Ribonuclease Inhibitor | 750 | 898 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g01954 | Cca-Chr1 | 45721400 | 45751354 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01954 | 42 | 834 | WRKY Transcription Factor Family | AT4G12020 | 34.275 | 1.59e-98 | 342 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01954 | - | - | gmx:100796110 | 1679.46 |