Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01927 ATGGCCAACCAAGCCTTCACAAACTTACTGGCCAATGACAAGCAATTCACTGCTCTTCAATTGCCACCTAAGGCCCCTACTAGCAATAAAAATAAGCCCAATGTCACTGAAGACCATGAAATTTTATTTCAAGCAAGAAATGTGTTGAAAACACATGAGAATCCTTCTCTTTCATTTCTTGGGGATGAACAGGTTATGGGGCCTCCAAATTCACCAAACATTGTGGAGGATTTGGCCCATGCCACTGGCTCCGATTTGGATGCAAAAACGAGACGAATGCAGGCCAACAGGGTGTATGCTGCGAGATATCGGCTCCGGAAACTAGCCAGGCTTCAACTTCTGAAGAGCCATGTTGAGTCCCTTGAAGCTCAAGTTTCAATGATTAGATCTCAACTGGTTTACTGGGAATCTACCTTCGACAAACTAGCTGAAGAGAATGCAATGATGAAAGCACAATGCGACGCTATTGGGAAGCTGATTGCTGAAAAAGAAGGTCTGAATTGGGCTCTGATGCAAGAGTTACAGAGTTTGAGAGAGTGCTATTGA 546 0.4414 MANQAFTNLLANDKQFTALQLPPKAPTSNKNKPNVTEDHEILFQARNVLKTHENPSLSFLGDEQVMGPPNSPNIVEDLAHATGSDLDAKTRRMQANRVYAARYRLRKLARLQLLKSHVESLEAQVSMIRSQLVYWESTFDKLAEENAMMKAQCDAIGKLIAEKEGLNWALMQELQSLRECY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01927 181 SUPERFAMILY Leucine zipper domain 89 142 IPR046347 GO:0003700|GO:0006355
Cca01g01927 181 SMART brlzneu 84 155 IPR004827 GO:0003700|GO:0006355
Cca01g01927 181 Coils Coil 111 131 - -
Cca01g01927 181 Pfam bZIP transcription factor 89 146 IPR004827 GO:0003700|GO:0006355
Cca01g01927 181 Gene3D - 85 150 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01927 26 178 bZIP Transcription Factor Family AT1G06070 24.675 2.06e-06 45.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca01g01927 bZIP_1 6.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01927 - K25624 ccaj:109815839 217.624