Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01915 ATGGTGCAATCTTCAGAAACAAGAGAAGGGTTCAATCTCATTCCTGATGTAAAATGGGAAGACGTTGGTGGCCTTGATCTCTTAAGAAATGAGTTTGATGACTATATCATAGGGCCTATAAAATGTCCTGGGGATTATGAGGGATTTGGGCTGGATCTTTCGACAGGATTTTTGCTTTATGGACCTCCAGGTTGTGATAAACCACTGGTTGCCAAAGCTGTTGCCAATGCTGCAGGAGTTAGTTTCCGTCATATTAAGTTTGGTAAAAGAGTAATGAAAATGTTACCAAGTATGACAGAGGGGATTATTCCATACCTTACCTCCTGCAAAGGCTTATTTAGAAAGAGGCTCCATATCTGGTGA 363 0.4105 MVQSSETREGFNLIPDVKWEDVGGLDLLRNEFDDYIIGPIKCPGDYEGFGLDLSTGFLLYGPPGCDKPLVAKAVANAAGVSFRHIKFGKRVMKMLPSMTEGIIPYLTSCKGLFRKRLHIW 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01915 120 Pfam ATPase family associated with various cellular activities (AAA) 58 100 IPR003959 GO:0005524|GO:0016887
Cca01g01915 120 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 106 IPR027417 -
Cca01g01915 120 Gene3D - 15 90 IPR027417 -
Cca01g01915 120 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 1 87 - -
Cca01g01915 120 PANTHER AAA-FAMILY ATPASE 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01915 Cca-Chr1 44851790 44854635 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01915 2 86 Calmodulin-binding Proteins AT3G56690 36.471 3.09e-14 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01915 K14571 - ccaj:109818835 182.956