Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01913 ATGGCTACCGCTGCTAATCTTCTCATGCCAGAAATGGGCGCCGGAAAGTTACATGTGCTCGTCATTGATGACAGCCACGTCGATCGCAAGGTCATTGAACACTTGCTAAAAATCTCATCTTGCAAAGTGACGGTGGTGGAGAGTGGGAGCATGGCTCTGCAGTATTTGGGGTTGGATAGGGATAAGAGCTCCATTAGTTTCGATAAGATAAAGGAGTCGTCTGTATTTAGAGAGATTCCAGTGGTGGTTATGTCTTCTGAGAATATCTTGACCCGAATTGATAGAGTGCTGTTGAGAGTGAGGAGGCTATGGGCACTGTGCTACTGCCATTGGCGGCAGTGCTGCATGAACTCACAACCTGGTCTAAAAGTTCAGACTCCCCATGACGAGTATACATGCTTTCAATATTCTGAGAGTGTTGATGATGGATTTCCAGCTGTCACATTTTATTTTGAAAATGGACTCTCCTTGAAAGTTTATCCACCTTCCCTCAAAGAGAAGATCAAGTGGTTGTGCAACTTCAAGAGTGAAGATCATCAATCTTCTTCACTAGGAGTTGCCATCACTAGTGGAGGAAAAGTTTGGTGTATCTCTTCAAATAGCTCTATTGATGCTCCAATCTTCATCCATGGATCTCTAAGCTTGGAAGCAAACCATAAATGGTGGACAAGACAAAGAGATGACACACCACTTCACAAtgaaaaaaggaagagttga 717 0.4282 MATAANLLMPEMGAGKLHVLVIDDSHVDRKVIEHLLKISSCKVTVVESGSMALQYLGLDRDKSSISFDKIKESSVFREIPVVVMSSENILTRIDRVLLRVRRLWALCYCHWRQCCMNSQPGLKVQTPHDEYTCFQYSESVDDGFPAVTFYFENGLSLKVYPPSLKEKIKWLCNFKSEDHQSSSLGVAITSGGKVWCISSNSSIDAPIFIHGSLSLEANHKWWTRQRDDTPLHNEKRKS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01913 238 Gene3D - 8 97 - -
Cca01g01913 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR 68 97 IPR045279 GO:0009736
Cca01g01913 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 62 IPR045279 GO:0009736
Cca01g01913 238 SUPERFAMILY CheY-like 16 92 IPR011006 -
Cca01g01913 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 68 97 - -
Cca01g01913 238 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 14 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01913 Cca-Chr1 44808031 44814386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01913 17 97 Response Regulator Gene Family AT5G62920 56.731 1.01e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01913 K14492 - gmx:100819165 124.405