Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01890 ATGTCAACCCAATTGAACCATGTCTTGAGAGTTTCAATTTTAAAGCACAAGACAACCCAATCAGAGACTCATTTGAGAGCCCCAAGATTTAAAGTGATCAATGCAACGTCCTCACCAAGAAGTGCAAGGCAGCTTATAGAGTCCGACACAGTGAGGCCCATAAGGCCCAACGATGCTTCCGCAGTTATGGACTCTGAGGGCTTTGTTCTCCTTGATGTTAGGCCAAGTTGGGAGAGGGATAAGGCACGTGTGAGGGGGTCCCTGCACGTGCCGATCTTTGTGGAGGACGAGGATAACACTCCTGTGACTCTGCTTAAGAAGTGGGTGCATTTTGGGTACATTGGCTTGTGGACTGGCCAGTACCTCACTACTGTGAATTCTGAGTTTCTTAGTCAGGTGGAAAATGCAATTCCTGGTAAGGATGCCAAGGTTCTTGTGGCGTGTGGAGAAGGGCTAAGGTCCATGACAGCAGCTTCAAAACTGTATAATGGAGGTTACAAAAATCTGGGATGGTTGGCTGGAGGCTTTAATCGTTCAAAGGACAATGATTTTCCAGCAGTAGAAGGAAAAGAGAAGCTGCAACATGCTACAGTTGGAGGAGTGTCTTACTTGTTCCTTCAGTTGCTCATTTTTCTGCAGGCTGTGGATTAA 651 0.467 MSTQLNHVLRVSILKHKTTQSETHLRAPRFKVINATSSPRSARQLIESDTVRPIRPNDASAVMDSEGFVLLDVRPSWERDKARVRGSLHVPIFVEDEDNTPVTLLKKWVHFGYIGLWTGQYLTTVNSEFLSQVENAIPGKDAKVLVACGEGLRSMTAASKLYNGGYKNLGWLAGGFNRSKDNDFPAVEGKEKLQHATVGGVSYLFLQLLIFLQAVD 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01890 216 Gene3D - 51 199 IPR036873 -
Cca01g01890 216 ProSiteProfiles Rhodanese domain profile. 64 188 IPR001763 -
Cca01g01890 216 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 1 216 IPR044614 -
Cca01g01890 216 SMART rhod_4 54 185 IPR001763 -
Cca01g01890 216 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 190 IPR036873 -
Cca01g01890 216 Pfam Rhodanese-like domain 58 178 IPR001763 -
Cca01g01890 216 CDD RHOD 58 177 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01890 4 203 Sulfurtransferasese or Rhodanese AT3G08920 55.500 1.40e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01890 - - gmx:100795945 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01890 01 44206160 44208097 Cca01g01890 01 44206160 44208097 ECH