Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01875 ATGCCAGTGTATGAAGCAGATTTTGGTTGGGGAAAGCCTGTGCATTTTGGTTTAGCACATGTATCTCAAGAGGATAGGGCAATGATTACTCGAAGCTCAGATGGAGATGGTGTTGTAGTCTCCATGCATTTCCAGACATCACAAATGCAACTTTTCAAGAAGTTCTTCTACCACTTCATGAGAGAGTCCCGGGCGGAGGTCTGGTTGGGCGGAGCTGTGGACGGAGCTAAGGCTGTCTGGTCGGGCGGAGAGGCGCGCACCAGAGGAGGTTTGATTGGACGGAGCGGCCGGTGCCAGAGGAGATCTGGTCAGAAAATTTTCGCGCGACGAAGGACCCCGGAGACGCGCGTGCTGCTAACGATTTTCGCCACCACCGCCATTCGCATGGCCGACTTCGACTACCACACCACCACCGTCGTGCGCACGGCCGGCTTGCATAACCACGCCGCCCCAGACGTGCTGCCGCTGCTTAGAACATGGCCATCGGAGGGAGTCCATTGA 501 0.5609 MPVYEADFGWGKPVHFGLAHVSQEDRAMITRSSDGDGVVVSMHFQTSQMQLFKKFFYHFMRESRAEVWLGGAVDGAKAVWSGGEARTRGGLIGRSGRCQRRSGQKIFARRRTPETRVLLTIFATTAIRMADFDYHTTTVVRTAGLHNHAAPDVLPLLRTWPSEGVH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01875 166 Gene3D - 1 63 IPR023213 -
Cca01g01875 166 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 58 - -
Cca01g01875 166 Pfam Transferase family 1 58 - -
Cca01g01875 166 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 3 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01875 Cca-Chr1 43813256 43816297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01875 1 59 Monolignol Biosynthesis Gene Families AT5G48930 35.000 4.34e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01875 K13065 - gmx:100779814 90.5077