Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01866 ATGGAACCGTTATGGCTATCCGATAGTGACCAAATCGGGCACCTAGGTCATGTGTCCACAATCTACATTTACAAAGCAAAACACAGTGGGGACATCATTGAAACGATGAAGAATTCTCTTAGCAAGATTTTAGTGCCCTACTATCCAATAGCTGGTAGATTGAGATTGACAGAAAGTGGTAGAATGGAAGTGGATTGTAACGCAAAGGGAGTGACTTTGATTGAAGCTGAAACCACCAACAGATTTGGGGACTATAAAGACTTTTCTCCCTCCGAGTCCACCAAGGAACTTGTTCCAGAAGTTGATTATACTCAACCTATGCAGGAGCTTCCCCTACTGTTGTTGCAGTTAACAAAGTTCCATGGTGGTGAAGGCCTTGCCCTTGGAGTTGTAGTGTCTCATCCTTTGACTGATGGTATTGCCCTTACTCACTTCATCAACACATGGGCAAAGTTAGCTCGAGGAGAAACACCAGAATCTAATGAAATACCATTTCTTGATCGAAAACTACTAAAATTACCGAACCAATCAGCTCCAAGCGTTGATCTCCCAGAGTGGAAGCCTGTGCCAAAAATACCAGCAGGACTAGAGCAAAACAAAAGAAGTGCTGCACTGTTGAAACTCACATCAAGCCAAGTGAAGAAGCTGAAAATGGCCAACAATGAATCTATGAAAGAAGGGGCAAGACCTTATAGCACATTTGAAGTTATATCTGCTCATATATGGAGATGTGCATCTAAGGCTCGTGAAATTGGTGAGAACCAACCAACTCTAGTTCGATTTAGTGTTGATATTCGCAATAGATTGATTCCACCTCTCCCTCAGAATTATTTTGGAAATGCTTTGGCAAAAACAGTGACACCTAAATGTTGTGTGGGAGATATCATATCAAACCCATTATGTCATGCTTCTCAAAAGATAAGGGAAGCAGTTTATGTGGTTACAAATGAGTATATAAGGTCACAATTATGTTCAACTTTAGGCCAAGAGCAATTGGATTACATAAGTTCTTTTTCAATGGACAAGGACAACAACATAAGGGTGTCCCGTATTCTGGGAGTCATAACATTCTTCTCACAAGCTGGATAA 1089 0.4096 MEPLWLSDSDQIGHLGHVSTIYIYKAKHSGDIIETMKNSLSKILVPYYPIAGRLRLTESGRMEVDCNAKGVTLIEAETTNRFGDYKDFSPSESTKELVPEVDYTQPMQELPLLLLQLTKFHGGEGLALGVVVSHPLTDGIALTHFINTWAKLARGETPESNEIPFLDRKLLKLPNQSAPSVDLPEWKPVPKIPAGLEQNKRSAALLKLTSSQVKKLKMANNESMKEGARPYSTFEVISAHIWRCASKAREIGENQPTLVRFSVDIRNRLIPPLPQNYFGNALAKTVTPKCCVGDIISNPLCHASQKIREAVYVVTNEYIRSQLCSTLGQEQLDYISSFSMDKDNNIRVSRILGVITFFSQAG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01866 362 Pfam Transferase family 4 340 - -
Cca01g01866 362 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 345 - -
Cca01g01866 362 Gene3D - 193 353 IPR023213 -
Cca01g01866 362 Gene3D - 1 188 IPR023213 -
Cca01g01866 362 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 2 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01866 Cca-Chr1 43626037 43627206 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01866 4 323 Monolignol Biosynthesis Gene Families AT5G48930 36.086 1.30e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01866 K13065 - ccaj:109790793 462.611