Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01837 ATGTTAAGAACAACTGAAAAGTTGTGCTTTAGTACTCCTGATTGTAATGAGAAAGAGAAACCAATCATGTTTCTCAAGCAAGCAAgtggtggtggtggtggtggtAGAGTCTTGGGAAACAAGAAGAAAATCACCGGGACTTGGACTTTCAGATTTCCAAAAGACCCTAAATTTTCACCTGTGAGATTCTTGCAGCAACTAGGAGCAAAAGTGGCAAGTGCTATTAGAGTTGTTTCCATGAGAAGGAGATCCTGTAGGAAGGTTTCTTCATCCTCTTTGGTCAGAACACGATCAGTGTCTGACCCCACTGATTCACATCGTGCCAAAGCTGTGGAAGATTGCATTGAGTTCTTACACTCTTCTTCGTCTAGGGAGAGACCAAGTTCAGTTTCTGAAAATTCTGTTAAGGGGTGCGTTTGA 420 0.3952 MLRTTEKLCFSTPDCNEKEKPIMFLKQASGGGGGGRVLGNKKKITGTWTFRFPKDPKFSPVRFLQQLGAKVASAIRVVSMRRRSCRKVSSSSLVRTRSVSDPTDSHRAKAVEDCIEFLHSSSSRERPSSVSENSVKGCV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01837 139 PANTHER - 1 132 - -
Cca01g01837 139 PANTHER JOSEPHIN-LIKE PROTEIN 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01837 Cca-Chr1 42905088 42905848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01837 - - ccaj:109791876 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01837 01 42905088 42905848 Cca01g01837 01 42905088 42905848 ECH
Cca07g01540 07 39846649 39847424 Cca01g01837 01 42905088 42905848 PCT
Cca01g01837 01 42905088 42905848 Cca07g01606 07 41072571 41081691 PCT