Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01830 ATGCTTATTTTCTTCTTTGTTTTTCTCGGGTCCATAAGCTTAGGCTTGGGGTTTCTCCTTCTCTTcaacgagctacagcaacaacaacaacaacGTTATCATAACCATGCACCTCCTTCACACCCCATCATTGGATGCCTCATTTCCTTTTACCAAAACCGCCACCGTCTCCTCGATTGGTACACCCACCACTTGGCCCAATCGCCTACGCAAACCATCGTCGTGCACCGCCTCGGCGCGCGCCGCACGGTGGTGACGGCGAACCCCCACAACGTGGAGTACATCCTGAAGACCAACTTCGCCAACTTCCCCAAAGGCAAACCCTTCACCGAAATCCTCGGCGACCTTCTCGGCTGCGGCATATTCAACGTCGACGGCGAGTTGTGGCACGCGCAGCGCAAGTTAGCCAGCCACGAGTTCACCACGCGCTCCCTCAGAGACTTCATCGTCAAAACCCTCAACGAAGAGGTTCACAATAGGCTTCTCCCACTCTTGGATTGGGCCGCACGTGGGAGCCACGTGATCGACCTTCAAGACGTGCTGCGGAGACTCACCTTTGATACGGTCTGCAAGGTGTCCTTAGGGCACGACCCGTGCTGTTTGGATTTGTCGAAGCCCTTGCCGCCACTCTTGACGGCGTTCGACACGGCTTCGGAGGTGAGCGCGGCGCGTGGGGCCGCGCCGGTGTTTGTGGTGTGGAAGATGAAGAGGATGTTTGACATGGGGTCGGAGAAGTCGATGAAGGAAGCGGTGAAGCTGGTGCACGATTCGGTGACGGAGATTATAGTAACAAAGAAGAAGGATATAAAGAAGGGGAAAAAAAGCATGGATTTGCTTGTTCGGTTGTTGGAGGCGGGGCAATCGGAAACGTTGGTAAGAGACATGGTTATAAGCATGATAATGGCGGGGAGGAACACGACTTCGGCGGCGATGACGTGGCTGTTTTGGTTGCTATCGAAGCAGCGAGAGGAAGAGGAGGTGATAGTGAAAGAGGTGAGTGAGAAGGGTTTGCGTTTGGACTACGAGTGGTTGAAAGAGATGAGGTTTCTGAAGGCGTGTTTGTGCGAGTCCATGAGGCTGTACCCTCCGGTTGCGTGGGACTCGAAGCATGCGATTGGTGCTGACGTGTTACCCGATGGGACTCGCGTGGGGAAAGGGGATAGGGTTACTTATTTTCCGTATGGGATGGGGAGAATGGAAGCTCTGTGGGGGAAGGACTGTTTGGAGTTTAAACCCCAACGGTGGTTCCATGAAGATAATGTTGATAATGGAATTGTGAAGAGTGTGAGTCCTTACAAGTTTGCGGTGTTTCTGGCGGGTCCTAGAGTGTGTCTTGGGAAGGAAATGGCTTTCATTCAGATGGAGTATGTGGTGGCTTCTGTTCTTAAGTCCTTTGTTATTTCGCCGGTTTCTGATGAGCGCCCGCGTTTTGTTCCTCTACTGGCGGCTCATATGGCTGGGGGTTTCAAAGTCAGGGTATACAACAGATCAACTGGA 1497 0.519 MLIFFFVFLGSISLGLGFLLLFNELQQQQQQRYHNHAPPSHPIIGCLISFYQNRHRLLDWYTHHLAQSPTQTIVVHRLGARRTVVTANPHNVEYILKTNFANFPKGKPFTEILGDLLGCGIFNVDGELWHAQRKLASHEFTTRSLRDFIVKTLNEEVHNRLLPLLDWAARGSHVIDLQDVLRRLTFDTVCKVSLGHDPCCLDLSKPLPPLLTAFDTASEVSAARGAAPVFVVWKMKRMFDMGSEKSMKEAVKLVHDSVTEIIVTKKKDIKKGKKSMDLLVRLLEAGQSETLVRDMVISMIMAGRNTTSAAMTWLFWLLSKQREEEEVIVKEVSEKGLRLDYEWLKEMRFLKACLCESMRLYPPVAWDSKHAIGADVLPDGTRVGKGDRVTYFPYGMGRMEALWGKDCLEFKPQRWFHEDNVDNGIVKSVSPYKFAVFLAGPRVCLGKEMAFIQMEYVVASVLKSFVISPVSDERPRFVPLLAAHMAGGFKVRVYNRSTG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01830 499 Pfam Cytochrome P450 38 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 SUPERFAMILY Cytochrome P450 38 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PRINTS E-class P450 group IV signature 444 462 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PRINTS E-class P450 group IV signature 293 319 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PRINTS E-class P450 group IV signature 347 363 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PANTHER CYTOCHROME P450 19 494 - -
Cca01g01830 499 Gene3D Cytochrome P450 25 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca01g01830 499 PANTHER CYTOCHROME P450 94B3 19 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01830 Cca-Chr1 42656606 42662255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01830 2 497 Cytochrome P450 AT3G48520 58.483 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01830 K20665 - gmx:100797785 748.043