Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca01g01824 | ATGTCTTCCATTTTTGCCCCCGGTTACTCTTTTAACATTCCCGACTTTGAGGTCAACGAGGCCGTCGGCGGGTGTATGCCTGAGACTCCGGAAGATAGTGGAGCATATGGGAGAATCCatgaagtgttcttgagcttcagagtgcgccatcaaaaaggcgagtttggaaaagcactcgaaaaacttcaggagaggatTTTAAGCTACGTGAATGAGGAGTTTCCGCAATTGGTGCGTGGGATTGGTGACAAATCGGAAGTGATGGATTCCCGATTGAAGGTCATGTTCCCGAATTGTAGGAAGGCACTTCGTGAGGCCGCTGGCATGTCAGGTGTTGTAGTACTCAACTCCAGAAATGAAAGGGAGACTATAAAAAATATTGTTGAAAATGTTGCACATTTGTTAGACAAGACAgagttatttgttgccaataatccagtgggagtagaacctcgagtacaagcaatgagtcaattgctactccaaaaatcatcaaatgatgtcctactattagggatgtgggggatgggaggcattggtaaaacaaccattgctaaagccatttacaataagattggccgcaattttgagggaaggagcttccttgcaaatatcagggaagtttggaggcaagacgttggccaagtcaatttacaagaacaacttctgtctgatatcaacaaagaaacaaaaataacgatacataatgctgaatcaggaaaaaatatattaaaaaaaatactttgctataaaaaggtacttcttgtattggatgatgtgaatgaattggaccaactaaatgctttatgtggaagttacaaatggtttggtccaggtagtagaataatcattaccactagagatcaagatatactcagagggagagttgacatagtatatacaatgaaaggcatggatgaaggtgaatccattgagctttttagttggcacgcattcaagcaagcaagtcctaaagaaaattttacccaactttctagaaatgtaattacgtattccgggggattgccactagcccttgaagtgcttgggtgttatttgtttgatatgaaggtagcagagtgggagaatgtattggagaaacttaagagaattcctaatcatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgatgatactgagagagatatattcctcgatatagcttgtttctttattggcatggatcggaatgatgttatacatatattaaatggttgtgggcttttcgcagaaaatggaatacgtgtccttgtagagcgaagccttgtaacaattgataataaaaacaagcttcgaatgcatgatttgataagggacatgggaagggaaatcgttcgtgcaaattcactaaaggttcttgagaagcgtagcaggttatggtttcatgaggatgcgcttgatgtattagcaaaagaaacgggaacagaagctattgagggactggctttgaggttatcaataaataatgcaacatgtttgagcactaaagcttttaaaaacatggagaaacttaggttgcttcaacttgctggtgtaagacttgatggagattttaaatatctttccaaagatcttagatggctgtgttggcatggatttcctttaaaatacataccaacaaacttttatcaaAGAAATCTTATTTCAATTGAGTTACAAAACAGTAATGTTCAACTTGTGTGGAAAGAAGCTCAGcggatggagaaacttaaaattctcaatcttagtcattctcattctttaacacagactccagacttttcaaaattgcctagtcttgaaaagttagaactcatagattgtccaaaattgtctaagatttctcataccattggacatctcaatcgaattcttcgaataaatttgcaagattgtattagtcttcataaccttccaaggagtatttataaattgaaaacccttaaaacactcattctttcaggatgttcaaagattgacaagttggaagaagacttggaacaaatggagtctttgacaatccttgttgcagataagactgcaataaaaagaattccgttttcaattgtaaggtcaaaaaGCATTGGATATATTTCTTTATGTGGTTATGAAGGATTCTCGCGTGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACCAATAGTCTCTCATCCTGCATTCAAACATCTGTGGGAAAGTCATCTCTTGTTTCTTTAGATGTGCCAAATAGCAGTTCTCATCATCTATCATATATTTTAGAGAACCTTCCAAAGCTTGAAAGTCTTTGCATAGAGTGCGACTCAAAACTTCAACTAACTCAAGAAGCAAAAAATATTATAGATGCCTTATATGCCACAAATTCTGAGGATTTAGAATCAACTACAACTCCCTTAGAAATGCCAGACATTGATGCTTCTACATTAATTGAATGCAACAAACATGCACACACTTCAGGGTCACAAAAATTGTTGGCATGTCATTTAATTCAAATGGGAACAAGTTGCCGAGTCACTTATATTCTGAGACAAAGCATTTTACAGAATAAAAGTACTGGTGATTGCAATTATGTGCTCCCTGGTGATAATTATCCAGAATGGTTAACATTTGACAACCAAGGTCGACCTCTCCTAAAGTGTGCACTCAATTTGGTCACGGTGGCAATGGTAAACGAGGTTGCTTTGGCCGAAGAGGTGGCCATGATGGTCATAGCAATGTTCAATGTCAAGTATGCAATAAAATTGGCCACATTGCTACCAATTGCTATCATCGTTTTGATCCCAATTATGATGCTCCAGGCAATTTTCAGTTTCAGAATCAATTCCCTCAACAGCAACAATTTCACTTCTTTTATATGCATCCTACACTATTACAATATTCCATTCTCCTTTTATTAA | 2916 | 0.1653 | MSSIFAPGYSFNIPDFEVNEAVGGCMPETPEDSGAYGRIHEVFLSFRVRHQKGEFGKALEKLQERILSYVNEEFPQLVRGIGDKSEVMDSRLKVMFPNCRKALREAAGMSGVVVLNSRNERETIKNIVENVAHLLDKTELFVANNPVGVEPRVQAMSQLLLQKSSNDVLLLGMWGMGGIGKTTIAKAIYNKIGRNFEGRSFLANIREVWRQDVGQVNLQEQLLSDINKETKITIHNAESGKNILKKILCYKKVLLVLDDVNELDQLNALCGSYKWFGPGSRIIITTRDQDILRGRVDIVYTMKGMDEGESIELFSWHAFKQASPKENFTQLSRNVITYSGGLPLALEVLGCYLFDMKVAEWENVLEKLKRIPNHQVQKKLKISYDGLNDDTERDIFLDIACFFIGMDRNDVIHILNGCGLFAENGIRVLVERSLVTIDNKNKLRMHDLIRDMGREIVRANSLKVLEKRSRLWFHEDALDVLAKETGTEAIEGLALRLSINNATCLSTKAFKNMEKLRLLQLAGVRLDGDFKYLSKDLRWLCWHGFPLKYIPTNFYQRNLISIELQNSNVQLVWKEAQRMEKLKILNLSHSHSLTQTPDFSKLPSLEKLELIDCPKLSKISHTIGHLNRILRINLQDCISLHNLPRSIYKLKTLKTLILSGCSKIDKLEEDLEQMESLTILVADKTAIKRIPFSIVRSKSIGYISLCGYEGFSRDVFPSIIWSWMSPTNSLSSCIQTSVGKSSLVSLDVPNSSSHHLSYILENLPKLESLCIECDSKLQLTQEAKNIIDALYATNSEDLESTTTPLEMPDIDASTLIECNKHAHTSGSQKLLACHLIQMGTSCRVTYILRQSILQNKSTGDCNYVLPGDNYPEWLTFDNQGRPLLKCALNLVTVAMVNEVALAEEVAMMVIAMFNVKYAIKLATLLPIAIIVLIPIMMLQAIFSFRINSLNSNNFTSFICILHYYNIPFSFY | 971 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca01g01824 | 971 | PANTHER | RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED | 42 | 880 | - | - | |
Cca01g01824 | 971 | Gene3D | Ribonuclease Inhibitor | 641 | 790 | IPR032675 | - | |
Cca01g01824 | 971 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 135 | 399 | IPR027417 | - | |
Cca01g01824 | 971 | SUPERFAMILY | L domain-like | 494 | 774 | - | - | |
Cca01g01824 | 971 | Gene3D | - | 305 | 388 | IPR042197 | - | |
Cca01g01824 | 971 | SUPERFAMILY | "Winged helix" DNA-binding domain | 375 | 481 | IPR036390 | - | |
Cca01g01824 | 971 | Gene3D | Ribonuclease Inhibitor | 492 | 640 | IPR032675 | - | |
Cca01g01824 | 971 | CDD | AAA | 147 | 292 | - | - | |
Cca01g01824 | 971 | Pfam | NB-ARC domain | 152 | 384 | IPR002182 | GO:0043531 | |
Cca01g01824 | 971 | Gene3D | - | 113 | 299 | IPR027417 | - | |
Cca01g01824 | 971 | PRINTS | Disease resistance protein signature | 339 | 353 | - | - | |
Cca01g01824 | 971 | PRINTS | Disease resistance protein signature | 648 | 664 | - | - | |
Cca01g01824 | 971 | PRINTS | Disease resistance protein signature | 170 | 185 | - | - | |
Cca01g01824 | 971 | PRINTS | Disease resistance protein signature | 247 | 261 | - | - | |
Cca01g01824 | 971 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 42 | 880 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca01g01824 | Cca-Chr1 | 42452645 | 42469820 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca01g01824 | 160 | 696 | WRKY Transcription Factor Family | AT5G45050 | 33.393 | 6.98e-76 | 270 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca01g01824 | - | - | ccaj:109804040 | 1632.46 |