Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g01774 ATGGGGGCTCGTTGCTCTAAATTCTCTTTTTGCTGGTTCCACTCCCACCTCAAACCTTCTGTGCTTGAATCTTCTGACCAAGAAAATGGTGAGAAGGGTGAGAGAAAATTGTGGCCTAGTTTTGGTGAGTTCAGTTTGGAGCAACTGAAGGCTGCCACAAATGGTTTTTCTTCGGAAAACATAGTTTCTGAGCATGGTGAGAAAGCTCCCAATGTTGTTTACAAAGGAAAGCTTGATAATGGACAGTGGATCGCAATCAAACGTTTCAACAAGTTTGCTTGGCCTGATTCTCGTCAATTCCTCGAGGAAGCCAGACAAGTGGGAAGCCTTAGAAGTGAACGTCTAGCAAATTTGATTGGTTATTGCTATGAAGGGGAAGAGAGGCTGCTAGTGGCAGAGTTTATGCCACATGAAACTCTTGCTAAGCATCTCTTTCATTGGGAGGCACAGCCAATGAAATGGGCAATGAGGTTGAGGGTGGCTTTCTACTTAGCTCAAGCTCTAGAATATTGCACAAGTAAAGGAAGAGGTTTGTATCATGATCTCAATGCCTACAGGATCTTGTTTGATCAGGATGCTAATCCCAGGTTGTCTTGCTTTGGACTCATGAAGAATAGTAGAGATGGCAAGAGTTACAGTACAAACTTGGCTTTCACCCCTCCGGAGTACTTAAGGACTGGTAGAGTGACTCCAGAGAGTGTGGTTTACAGTTTTGGAACCCTTTTGCTAGATCTCTTGAGTGGTAAACATATTCCCCCAAGCCATGCACTTGACCTGATTCGTGGCAAAAACTTTTTGATGTTGATGGATTCTGCCTTAGAGGGTCATTTTTCAAAGGATGATGGAACCGAGTTGGTTCGTTTGGCTTCTCGTTGTTTACAATATGAAGCTCGTGAGAGGCCAAATGCGAAGTCTCTCGTTGCATCTCTTATGTCACTTCAGAAAGAAACAGAGGTTCTCTCATATGTTCTGATGGGTCTGAAGCAAGAAACTGCATCCTCAACAAAGCAACTGTCATTGACACCTTTTGGTGAAGCATGTTTGAGACTTGATCTCACTGCAATACATGAAATACTAGAGAAGACTGGTTACAAGGATGATGAAGGAATTGCCAACGAGCTTTCCTTTCAATTGTGGACCAGTCAAATGCAGGAGACCTTGAATTTGAAGAAGCATGGAGATACTGCTTTTCGAGCTAAGGACTTTGCCACTGCCATTGATTGCTACACTCAATTCATAGATGGAGGGACGATGGTGTCACCAACAGTGTATGCAAGGCGTTGTTTATCATATTTGATGAATGACATGGCACAAGAAGCTCTTGGGGATGCCATGCAAGCCCAAGTGGTGTCTCCAGAGTGGCCCACTGCTTTGTATCTTCAAGCAGCCTGTCTTTTCAGCCTTGGAATGGAGAATGATGCACAAGAGACTCTCAAAGATGGGACCAACATGGAAGCCAAAAGAAACAAAAATTGA 1476 0.4377 MGARCSKFSFCWFHSHLKPSVLESSDQENGEKGERKLWPSFGEFSLEQLKAATNGFSSENIVSEHGEKAPNVVYKGKLDNGQWIAIKRFNKFAWPDSRQFLEEARQVGSLRSERLANLIGYCYEGEERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVAFYLAQALEYCTSKGRGLYHDLNAYRILFDQDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKDDGTELVRLASRCLQYEARERPNAKSLVASLMSLQKETEVLSYVLMGLKQETASSTKQLSLTPFGEACLRLDLTAIHEILEKTGYKDDEGIANELSFQLWTSQMQETLNLKKHGDTAFRAKDFATAIDCYTQFIDGGTMVSPTVYARRCLSYLMNDMAQEALGDAMQAQVVSPEWPTALYLQAACLFSLGMENDAQETLKDGTNMEAKRNKN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g01774 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK6 1 491 - -
Cca01g01774 491 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
Cca01g01774 491 Pfam Protein tyrosine and serine/threonine kinase 73 310 IPR001245 GO:0004672|GO:0006468
Cca01g01774 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
Cca01g01774 491 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca01g01774 491 SUPERFAMILY Protein kinase-like (PK-like) 37 319 IPR011009 -
Cca01g01774 491 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
Cca01g01774 491 SUPERFAMILY TPR-like 387 480 IPR011990 GO:0005515
Cca01g01774 491 Gene3D Tetratricopeptide repeat domain 383 491 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g01774 Cca-Chr1 41523401 41529456 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g01774 19 310 Glycoside Hydrolase AT3G07070 33.125 7.57e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Cca01g01774 PK_Tyr_Ser-Thr 3.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca01g01774 - - gmx:100814477 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g01774 01 41523401 41529456 Cca01g01774 01 41523401 41529456 ECH